Tribolium castaneum (red flour beetle): 657490
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Entry
657490 CDS
T01046
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca04120
Ubiquitin mediated proteolysis
tca04137
Mitophagy - animal
tca04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
657490
04120 Ubiquitin mediated proteolysis
657490
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
657490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tca04131
]
657490
04121 Ubiquitin system [BR:
tca04121
]
657490
03029 Mitochondrial biogenesis [BR:
tca03029
]
657490
Enzymes [BR:
tca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
657490
Membrane trafficking [BR:
tca04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
657490
Aggrephagy
Other aggrephagy associated proteins
657490
Xenophagy
Other xenophagy associated proteins
657490
Ubiquitin system [BR:
tca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
657490
Mitochondrial biogenesis [BR:
tca03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
657490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
IBR_2
IBR_1
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
657490
NCBI-ProteinID:
XP_969040
LinkDB
All DBs
Position
LG5:3726040..3729920
Genome browser
AA seq
440 aa
AA seq
DB search
MMSFIINVIKDLLHKMLQFLSFSRKTLSNNLSIYIKTNTGNTLSVDLDPTWDIKEVKEFV
APQLGLKPGEVKIIFAGKELGDNISISECDLGQQSTLHAIKITKKPNPPTLNNAVIEESD
EGKPLCETLSDLSFSNDDSEEGPTEQRKVHFFVYCPTCKALKNGKLRVRCHFCKSGAFTV
HSDPQNWNDVLQSKQITGLCENNPELCANVLNNKEPTFAEFYFKCSEHTSLGETDEAVPL
YLIRPNLKEVPCLACADINETVFVFPCKEGHVTCLDCFRQYCTTRLRERQFWQHPEFGYT
LACPAGCPDSFIQEIHHFRLLSESQYTQYQRFATEEYVLRSGGVLCPQPGCGMGILADPE
CTKITCINGCGYVFCRLCLQGFHIGECEAPEGDVGAPGDCSYNVDPTRAAEARWDEASKV
AIKVLTKPCPKCRTPTERDG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttttattatcaacgtaattaaagatttgttgcataagatgttacaatttctg
tcatttagtagaaaaacgctgagcaataatttgagtatttacataaaaaccaacacaggg
aatacgctttcggtcgatttggaccccacctgggacataaaagaggtgaaagagttcgtt
gcgccccaattgggactgaaaccaggcgaggtaaagattattttcgctggaaaagaactg
ggagacaacattagtatttctgaatgtgatttgggccaacaaagcaccctccacgctatc
aaaatcaccaaaaagcccaaccctcccactttaaacaatgccgtaattgaggaaagtgac
gagggcaaacctctgtgtgagaccttatcagatttgagtttttcaaacgatgattcagag
gaagggcccaccgagcaacgcaaagtccacttttttgtctattgccccacgtgtaaagcc
ctcaaaaatgggaaattgcgagttcggtgccacttttgcaaatcgggggctttcacggtg
cactcagacccccaaaactggaatgatgtgctgcagtcaaagcagataaccggcctttgt
gagaataaccccgaattgtgtgccaacgttctgaacaacaaagaaccgactttcgccgaa
ttttatttcaaatgctcggagcacacgtccctcggagagaccgacgaggctgttcccctc
tatctaattcgtccgaatttaaaagaagtgccttgtctagcgtgcgctgacataaacgaa
accgtgttcgtctttccatgtaaagaaggccacgttacttgcctcgactgtttccgccag
tactgcacgacacggctgcgggaacgccaattctggcaacaccccgagtttggctacacg
ctagcgtgccccgctggctgtcccgactccttcatccaggagatccaccattttcgcctc
ctgtcagagagtcaatacacacaatatcagagatttgcgactgaagagtatgtgttgcgc
tccggtggggtgctctgcccccagccgggctgcggcatgggcatactggcggaccccgag
tgcaccaaaatcacgtgcatcaacggctgcggctacgttttctgccgcctgtgcctccag
gggttccacattggggagtgcgaagcgcccgaaggggacgtgggggccccgggggattgt
tcgtacaatgtggaccccacaagagccgcggaagcccgttgggacgaagcttcgaaagtt
gcgattaaagtcttgacaaagccctgtcccaaatgtcgcacccccactgaacgagatggt
tag
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integrated database retrieval system
