Tribolium castaneum (red flour beetle): 658027
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Entry
658027 CDS
T01046
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
658027
03015 mRNA surveillance pathway
658027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
658027
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
658027
mRNA cycle factors
P-body specific factors
658027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
658027
NCBI-ProteinID:
XP_969534
UniProt:
D6WHX3
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All DBs
Position
LG3:complement(8146793..8152916)
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AA seq
1125 aa
AA seq
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MTVTESSEHDGEKDENSAEAPSEDDKNVLTSYIQEVEERFVCKQELRSANQNAANTRPSE
SHFSKLDSSLKKNTAFVKKIKNFSANQVDTYLKDMTGLNLSKYISEIAAAIVDAKLKMTD
VGAAVKMCSVLHQTYADFSQHLFENWQKTLAFKVGEKIPNPSKLRVDLRFYAELVQAGVF
SNKNAFTLLGTVITTLVNMDKDEHYNCSIILSFCKHCGEDYAGLVPRKMRELSEKFDIPI
PKSTFLPPEKQQNVRTLLRDYYVSLSKHLVKDHQEIQNFEKQNMRILQTKGELSQERKDK
LEALQTSYDKLLASTQSFAEILDEDMPTLKNQTLMKNDESMIVTGAGPDLDEAALANIEN
VWCDIETQRFYCELPELQAFLPTSYINKQAPPPEESVTEEVLDSEIPTEELEDDEKAEEA
PVAAEDEPEDSATTNASNKILLEAFFNNLPNCVNREMIDNAAIDFLVTLNNKHNRKKLVR
ALFGVNRTRLDLLPFYARFVAILRPALPEVGNELCQMLRQDFKYHVRKKDQINIESKIKV
VRFIGELVKFKLYSKIEALYCLKVLLYDFSHHHIEMACNLLEVCGRFLYCSPDSHQRTRV
YLEQMMRKKAVMALDSRYVTQIENAYYYVNPPEVTITKKERPIMHQFIRKLLFQDLQKNN
TDKIMRLIRKLDWGNEDVSAYAIKCLSSAHNVKYFNIRCLANLLAGLVTYQEEVGTRVVD
SVLEDIRLGMEVNLPKYNQRRVAQVKYLGELYNYRMVESADIFKVLYSLITFGVSMDPNI
PSPLDPPNHLFRIRLACVLLETCGTYFSSGSSKRRLDYYLIFLQSYYWFKRDLWKDAFPP
TLEHIFKDTLTTLRPKIKLCQSYEETQTELNNIRVTLGFDKITGDLNENKVEEDGLETIA
ETDTEEQDEVSEVTAPITDDTATEDETVDHTQGSDDEGEPDVSEAEQEQVSESLAIPSGP
RKVECPEDEDFLNALDKMVSENIQERMREPVKAGNVDISVPVVLKSNKKTYEQLQDAPET
EPNKIGFVLMVRKGNKQQYKNFEADINSELAQNLRDQELAQKEEKERVKRLTLNITERFE
EEDYQDMMQQQNRPVTQNLNRERKKYQHPKGAPDADLIFGPKRVR
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgaccgaatcctcggaacacgacggtgagaaagacgagaacagtgccgaggcc
cccagcgaagacgacaaaaacgtcctaacctcttacatccaagaggtggaagagaggttt
gtttgcaagcaagagctgcgaagtgccaaccaaaatgcggcaaatacgcgccccagcgag
tcccacttcagcaagctggactccagcctcaagaagaacacggcgtttgttaagaaaatc
aaaaacttctctgccaaccaagtggacacatacttgaaagacatgacggggctgaacctg
tccaagtacatatcggagattgcggctgcgatagtcgatgctaaattgaaaatgaccgat
gtgggcgcagccgtaaagatgtgcagtgttttgcaccagacttacgctgatttctcgcaa
cacttgtttgagaactggcagaaaaccctggcctttaaagtgggtgagaagattccaaat
ccgagtaaactgagggtggatttaaggttttatgccgagttggtgcaggctggggtgttt
agcaataaaaacgcgttcactttgctggggaccgtgatcaccactttggtcaacatggac
aaggacgaacactacaattgctcaataatcctcagcttttgcaagcactgcggcgaagat
tacgcaggtctggtccctcgcaagatgcgggaattgtccgaaaaattcgacatccccatc
ccgaagagcactttcctgccgcccgagaagcagcaaaacgtgcgcaccttgctgagggat
tactacgtttcgctcagtaagcatctcgtcaaagaccaccaagagatccaaaacttcgag
aagcagaacatgaggatactccaaaccaaaggcgagttgagtcaagaacgaaaagacaag
ctcgaggcgcttcaaacatcgtacgataaattattagcttcgacacaaagttttgcggaa
attttagacgaagatatgccaactttgaaaaatcagactctcatgaaaaatgatgagagt
atgatagtgacaggtgcggggcccgatttggacgaagctgcgttggctaatatcgagaat
gtttggtgcgatattgaaacgcagaggttttactgcgagttgccggaattgcaagctttt
ttgccgacttcttatataaataaacaggcgcctccgcccgaggagtcggtcactgaggag
gtgctggattcggaaataccaactgaagaactggaagatgacgaaaaagccgaggaggcg
cccgtggcagcggaagatgagcccgaagactctgccacaaccaacgccagcaataaaatc
ctcctcgaggcatttttcaacaacttgcccaactgcgtgaaccgcgaaatgatcgacaac
gcagccatcgatttcctcgtaaccctcaacaacaaacacaaccgcaagaagctggtccgt
gccctgttcggggtaaaccgcacccgtctcgacctcctcccgttctacgcccgcttcgtg
gccatcctccgtccagcccttcccgaagtgggcaacgaactgtgccaaatgctgcggcaa
gacttcaaataccacgtacgcaagaaagaccaaattaacatcgaatccaaaataaaagtc
gtacgatttatcggcgaactcgtcaaattcaagctctattcaaaaatagaagctctctat
tgtctcaaagttctgctgtacgatttctcgcaccatcacatcgaaatggcctgcaatctg
ttggaagtttgcggccggtttttgtactgcagtcccgactcgcatcaaaggacgagggtg
tatttggagcaaatgatgaggaaaaaggccgttatggcgttggattcgagatatgtgacg
caaattgaaaacgcctattattacgtcaatccgcccgaagtaacaatcacgaagaaggag
aggccgataatgcaccagtttatccggaaattgctctttcaagacttgcagaagaataac
actgataagattatgaggctgattaggaagctggactggggcaacgaggacgtgtccgct
tatgcaataaagtgtctaagcagcgcccacaacgtgaagtatttcaatatcaggtgtctc
gcaaatttgcttgcgggcttggtgacctaccaggaagaggttggcactcgtgtagtggac
agtgttttagaagacattcggttaggtatggaagtaaatcttcccaaatataaccagaga
cgtgtagctcaagtaaaatatcttggggagctgtataactacagaatggttgaaagcgct
gacattttcaaggttttgtattctttgataacatttggagtttcaatggatccaaacata
ccgtcgccactcgatccaccaaatcaccttttccgaataagactggcttgtgttttactt
gaaacatgcggcacgtatttcagcagcggtagcagtaagaggagactagactattattta
atatttctgcaatcgtattattggttcaagcgcgacttgtggaaagatgcatttcctcca
acactggagcacatttttaaagacactctcacgaccctgagaccaaaaattaaattgtgt
caaagctacgaagaaacacaaaccgagttaaataatattcgcgtcactttgggctttgat
aaaatcactggagatttgaacgaaaataaagttgaggaagacggcctggaaacgatcgct
gaaaccgacactgaagaacaggacgaagtgtccgaagtcacggcacctattactgatgat
accgccactgaggacgaaacggtggaccacacacaaggctcggacgatgaaggggaaccc
gatgttagcgaagctgagcaagaacaagtgtccgaatcgctggcaattcccagtggcccc
cgcaaggtcgagtgccccgaggacgaggactttttaaacgctttggataaaatggtttcg
gagaacatccaagagcggatgcgcgagccggtgaaggccggaaacgtggacatttccgtt
ccggttgtcctcaaatcgaacaaaaagacctacgagcagttgcaggacgcccctgaaacg
gaacccaacaaaatcgggttcgtgctaatggtccgcaaaggaaacaagcagcaatataaa
aatttcgaggctgatatcaactccgaactcgctcagaatctgagggaccaggagttggct
cagaaggaggagaaggaacgagtgaagcgcttgacgctgaacatcacggaacggtttgaa
gaggaggattatcaagacatgatgcagcagcagaacaggcccgtgacccaaaacttgaac
cgcgaacgcaagaaataccagcaccccaagggggcgcccgacgccgacctgatttttgga
cctaagagagttagataa
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