Tribolium castaneum (red flour beetle): 658224
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Entry
658224 CDS
T01046
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03018
RNA degradation
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
658224
09123 Folding, sorting and degradation
03018 RNA degradation
658224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
658224
03041 Spliceosome [BR:
tca03041
]
658224
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
658224
mRNA degradation factors
5'-3' decay
Lsm complex
658224
Spliceosome [BR:
tca03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
658224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
658224
NCBI-ProteinID:
XP_969723
UniProt:
D6WYZ2
LinkDB
All DBs
Position
LG8:13573017..13573571
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AA seq
113 aa
AA seq
DB search
MASSGDKSKNQSGDQKEKKRKESILDLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVL
DNTIEYLRDPDDPYKLTEDTRALGLVVCRGTSVVLICPMDGMESIQNPFISQD
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcaggtgacaaatcaaaaaatcagagcggtgaccaaaaagagaagaaacgt
aaagagtcgattctagacctctctaaataccttgaaaagacaattagggtgaaatttgcg
ggcggccgagaagctagtggtattttaaaaggctatgacccccttttgaacctcgtctta
gacaacacaatcgaatacttgagagatccagacgacccttataaattaacagaagacacg
agggccttgggtttggtggtctgtaggggcacaagtgtcgtgctcatatgccccatggac
ggcatggagtccatacagaacccctttatatcccaagactaa
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