Tribolium castaneum (red flour beetle): 658288 Help Entry 658288            CDS       T01046                                  Symbol rad50 Name (RefSeq) rad50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism tca  Tribolium castaneum (red flour beetle) Pathway tca03440   Homologous recombination tca03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:tca00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     658288 (rad50)    03450 Non-homologous end-joining     658288 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tca03032]     658288 (rad50)    03400 DNA repair and recombination proteins [BR:tca03400]     658288 (rad50) DNA replication proteins [BR:tca03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     658288 (rad50) DNA repair and recombination proteins [BR:tca03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      658288 (rad50)     BRCA1-C complex      658288 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      658288 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 SMC_N AAA_21 Rad50_zn_hook AAA_29 SbcC_Walker_B AAA_15 AAA_19 AAA_16 DUF3896 Motif Other DBs NCBI-GeneID:  658288 NCBI-ProteinID:  XP_969783 UniProt:  D2A5X5 LinkDB All DBs Position LG6:complement(3442760..3447047) Genome browser AA seq 1309 aa AA seqDB search MATLERLQISGVRSFGPNEEHCQTIKFATPLTLILGQNGSGKTTIIEAIKYVCTAELPQG TNGGQGFVNDPKMSSLTTTRGQIKLRVVDSKNNAVTISRIMELTQTAINTQRFSSKGATI RIVKPNGDDSSISGRCADITNECCQIMNVSSSILNNVVFCHQENSAWPLDEGKKVKEKFD EIFDAQQSNKCVEIYRKLLKEKQEKIKLLKLELEYKKEKKEQVDKDKRVLQDKEAKLESF DAEIAQKMTKLQPVKKRIDEIIDLEKVLSELERDLATKEATKNGLVEEQKTIKKNLAFEF EGTDQELQDKIKSFENERQKDETLIQDLVKRQNDIETKKREINEAVQKTQSDLGRLNQQK SHNLKKCCERKKLFDQALDKFRVKISNFDDNTGAKHAINQLKSALNERQDDLGTLIEEKE LDLMSLQATLDDVRAKSIKTQQIISSKTREVTDCEQKIESVSLELAALASSDEFLQDYTK RLEAISKTIFNLNNSFRETEESERMEASRSQVTTLEHNLDGLEREYRILLQNDTVEGKIE SERHLIMEKQREINKIKSKHAESLRELFGTQSPDCNLKDAVLAKQKSADLALQTLNEQIA RKQKDVTTLEVQLQNQIERIGSCQRDLKTGREKISQVCNGRDFDEVLTRCSEKKERLQRD KGNYTSVKIIYNQYIKKFEEERPCCPVCETNFSGKTTVVGKIITTLKSKLDKVPQQLAKV ETELVEEEALYNKLQQLKVVNDEITVLTREKLPELESGLNEIKRDYEAKKTDLEALKQQT CGPLKTLEISKSVISDVSTLDQNQADVDKSQKTVEKLKRELALVPSQKSKQEVEAEIDST KAELSELRRKIEAQTKKINSHKDRLQQLTQERNALFEKQIRMKDSMQNRPNLEAQLNEAN EKLQTLRGEIVAKKTELEDLEDELGKIETQKKNLVQENKTVVEKERNQVAMFGNLVHNIE KLEGEIEDYVREGVDEKLAALETTLGEFRQKEATLDHTKTKILNLLSEKREALAKHELRF RTLQSNVTLREKKVLELDLVLKIEDLRKLIGGHDYRTVYDEKCELIRQKESHEKTINSIT GEKNALLETVDDLRLKLAKPDWKNAYSNYMTKLYELKLAECVVKDLFKYITVLEKAILEF HATRMKQINKTIREMWREIYRGNDVDYIEIKAEHAGSTTANRKRTYNYRVVQVKKGVELE MRGRCSAGQKVLACLIIRMALAETLSANCGILALDEPTTNLDRENIFSLCEALARIVESR QKEKNFQLVVITHDEEFINALTRAQGVPFFYRVSRNQDGFSVIKKEYAL NT seq 3930 nt NT seq  +upstreamnt  +downstreamnt atggcaactttagaacgcctccaaatctccggcgttcgcagctttggccccaacgaagaa cactgccaaacaataaaatttgcgacccctttaaccctaattctgggccagaacggttcc ggcaaaaccactataatcgaagccatcaagtacgtatgtaccgccgaactgccccaaggg acaaatgggggccaagggttcgtcaacgaccccaaaatgtcgtccctaaccaccacaagg ggccaaattaaactacgcgttgttgactcgaaaaacaacgcggttacgattagtcgcatc atggaattaacccaaactgcaatcaacacgcaacggttcagctcaaaaggggcgacaatc cgtatcgtgaaaccaaacggcgacgactcgagcatttccggccgttgtgccgatattaca aacgagtgttgtcaaataatgaacgtttcgtcttcgattctcaataatgtggtgttctgt caccaagaaaactccgcctggcctttggacgaaggcaagaaagtcaaggagaagtttgac gagattttcgacgcccaacagtccaacaaatgcgtggaaatttaccgtaaactgctcaaa gaaaagcaagagaaaatcaagcttcttaaactcgaacttgaatacaaaaaagagaagaaa gaacaagtggataaagacaagcgagtcttgcaagacaaagaggcgaaacttgagtcattt gacgccgaaatcgcgcaaaaaatgacgaaactacaaccggtcaagaaacgaatcgatgaa attatcgacctggagaaggtcctaagtgagctagaacgcgatttggcgactaaggaagcc acgaaaaatgggctagttgaagagcaaaaaaccatcaagaaaaatctagcttttgagttc gaaggcacggatcaagaactacaagacaagatcaaatctttcgaaaacgagcgtcaaaag gacgaaacgttgatacaagatttagtcaaacgccagaacgacattgaaaccaaaaagcgg gagattaacgaagcggtgcagaaaacacaaagtgacttgggacgcttgaaccaacagaaa agtcacaacttgaagaagtgttgcgaacgcaaaaaattattcgaccaggctttggacaag ttccgtgtgaagatatcgaactttgacgacaataccggagccaaacatgcaataaatcag ctaaagtccgctctaaatgagcgccaagacgatctggggacacttattgaagagaaagaa ttggacttgatgtccctacaagccacacttgatgacgtccgtgccaaaagcatcaaaacc caacaaatcatttcgtcaaaaacgcgagaagtcaccgattgtgagcaaaaaatcgaaagt gtttcactcgagttggccgcacttgcctcctctgatgagttccttcaagactacacgaaa cgtctggaggccatcagtaagacaatcttcaacttgaacaactcgttccgtgaaaccgaa gaaagcgaacgaatggaagctagtcggagtcaagtcacgaccttggaacacaatctagac ggcttggagcgggagtatcgcatcctcctccagaatgataccgttgagggaaaaatcgag agtgagaggcacctaattatggaaaaacaacgggagattaacaagattaaaagcaaacat gcggagagtcttcgagaattgtttgggacacaatcgcctgactgcaatttgaaagacgcc gttttggcgaaacagaaaagtgcagatctggcgcttcaaacactcaatgagcaaatcgcg cggaaacaaaaggacgtgaccacgcttgaagtgcaactacagaaccaaatcgaaaggatt ggttcctgccaacgggacttgaaaaccggccgtgagaaaatatcacaagtgtgcaacgga cgcgactttgacgaagtcctaacccgttgttccgaaaaaaaggaacgcttacagcgggat aaggggaattacacttcggttaaaattatctacaaccaatacattaagaagtttgaagag gagaggccgtgttgtcccgtttgtgagacaaatttttcggggaaaaccacagtcgtcggt aagattataacaacgttgaaaagtaaactcgataaagtccctcaacaactggcgaaggtt gaaaccgagttagttgaagaggaggcgttgtacaacaaattgcaacaattgaaagttgtc aatgacgaaatcactgtcttgacgagggaaaagctgccggagctggaatcgggtcttaac gagatcaagcgcgattacgaggcgaaaaaaaccgacttggaggcgttaaaacaacaaact tgtgggcctttgaagactttggaaatctccaaaagtgttatctctgatgttagcacgctg gatcagaatcaagccgacgttgacaagtcgcaaaagacagtcgagaagttaaaacgtgag ctggcacttgtcccttcacagaaatcgaagcaagaagtcgaggctgaaattgactcgacc aaggccgagttgagcgaattgaggcgcaagattgaggcgcaaaccaagaaaatcaacagc cataaggaccgcttgcagcaactgacccaggaacggaacgctctgtttgagaagcaaatc cggatgaaggacagtatgcaaaaccggccaaaccttgaagcacagttgaacgaagcgaac gagaaactccaaactttgaggggggaaatagtggcgaaaaagaccgaactggaggatttg gaagacgagttggggaaaatcgagacgcagaaaaaaaacctcgttcaggagaacaaaact gtcgttgagaaggaacgaaaccaagtggccatgtttggtaacctagtccacaacattgag aaactggaaggcgaaattgaggattatgtgcgcgaaggtgttgacgaaaagttggcggcg cttgaaactaccttgggggagtttcgccaaaaagaggcgactcttgatcacacgaaaacg aaaattttgaatttactgtcggagaagagggaggctttggcgaaacatgagctgcgcttc cggacgttgcaaagcaacgtaactttgcgcgagaaaaaggtgcttgagttggatttggtg ttgaaaattgaggatttgaggaagttgatcggtgggcatgactaccgtacggtctacgat gagaagtgtgaattgattaggcaaaaagagagtcacgaaaagaccattaatagtataact ggtgagaagaacgcgcttttggagacggttgacgatttgcggctcaaactggcaaagccc gattggaaaaatgcctacagtaactatatgacaaagttgtatgaactcaaactggccgaa tgcgtggttaaagacttgttcaagtacatcacggtcctcgagaaggccattctggagttc cacgctacgcgaatgaagcaaatcaataaaacaatccgcgaaatgtggcgtgagatatac agggggaacgacgttgattacattgagatcaaagccgagcacgctggctccacaacggcc aataggaaacgcacctataactacagagtggttcaggtgaagaagggagtggagttggag atgcgggggcgctgcagtgccggtcagaaagtcctagcttgtctcattatacgtatggct ttggctgagacgttgagtgccaattgtgggattttggcgcttgatgaaccgacgactaat ttagatagggagaatatctttagtttgtgcgaagctttggccaggattgtggagtcgagg cagaaagagaagaattttcaactggtggttattacgcacgatgaggagttcattaatgcg cttacgagggcacaaggtgtgccctttttctacagggtgtcgcggaaccaggacgggttc tcggtcattaagaaggaatacgcgttgtaa

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