Tribolium castaneum (red flour beetle): 658510
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Entry
658510 CDS
T01046
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
658510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tca03041
]
658510
Spliceosome [BR:
tca03041
]
Complex A
U1 snRNP components
U1 related factors
658510
Complex B
658510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
SNU71_RBD
Motif
Other DBs
NCBI-GeneID:
658510
NCBI-ProteinID:
XP_008195028
UniProt:
D2A466
LinkDB
All DBs
Position
LG6:9094308..9104599
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AA seq
747 aa
AA seq
DB search
MDPNVPPPTFPPPAMGTPPLMPPVQMGFQPLIPPFSVPPPGFGAFPPPPNPLEQWTEHKA
PDGRTYYYNSITKQSSWQKPDQLKTPAELMLSQCPWKEYVADNGKVYYHNVNTKESRWVM
PPELEEIKKKIATEEGKGVSATATPTDVSSPAQLPVAPIASNSNSPSIASSPGGKSALES
SMAATLAAISLPNPTKTEEDAAPAIPSEAPKEPPKPAPEPVKVFKDKKEAMEAFKELLKS
KNVPSNATWEQCVKIISNDPRYETFKKLNEKKQVFNAYKTQKQKDEKEESRLKAKKSKEQ
LEEFLLNCDKITSATKYYKCDELFAHLEVWTSVSDSDRRDIYEDVVFALAKREKEEGKVL
KKRNMKKLAEVLDSMTKINYDTTWSEAQVLLLANNAFKNDVNLLAMDKEDALIVFEEHIR
VLEKEYVEEKEREKKRQKRQCRKNRDQFLALLDHLHEEGKLTSMSLWVELYPIISADIRF
SAMLGQHGSTPLDLFKFYVEDLKARFHDEKKIIKEILKEKNFEVRVDTSFDQFATVICED
KKSATLDAGNVKLTYNSLLEKAEAREKERLKEESKRLKKLEMGFKNLLREMNIDFELSWD
EVKPKIENEEEYLAFSCDSERIKIYKDFQHEMEESCSHHHSRSKKSKKKKSKKYKSSSSD
SESEKKKKRRSRSESNSDDSEEEYRKKKSKKKHKRKSPSRTPSVDKHISRRPSEGDAIVG
KSGELSESELEKQRALLLAQLKEPESE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaatgttcctccccccacgtttccgccccctgcaatgggtaccccaccattg
atgccccccgtccagatgggtttccagccccttatcccgcctttcagtgtcccaccgccc
ggttttggggctttccctccgccccctaatccattagaacagtggacggaacacaaagcc
cccgacgggcgcacttactactacaattccataaccaagcaaagttcctggcaaaaaccc
gaccagttgaaaacaccggctgagttgatgttgtcgcaatgtccgtggaaggagtacgtt
gcggataatggtaaagtgtattaccataatgtcaatacgaaggaatcgcggtgggtcatg
ccccctgaattggaggaaattaagaagaaaatcgcaactgaggaggggaagggtgtgtcg
gcaacggccacgcctactgatgtttcaagccccgcccaactaccagtggcaccaattgcc
tcaaactcaaattccccaagtattgcgtcaagtcctggcgggaaaagtgcgttggagtcg
tccatggctgccaccctagcggctataagtctcccaaatccgacaaagacagaagaggac
gcagctccggctattccaagtgaggcccccaaagagcccccaaaaccggcccccgaaccg
gtgaaagtctttaaagataagaaggaagcaatggaggcgtttaaagaattattaaaaagt
aaaaatgttccctcgaatgccacgtgggaacagtgcgttaaaatcatatcaaatgatcca
cgatacgaaacttttaaaaagttaaatgagaagaaacaggtcttcaatgcgtataaaaca
caaaaacagaaagatgaaaaagaggaaagtcggcttaaggcgaagaaatcgaaagaacag
ttggaggaatttttgctaaattgtgacaaaatcacctcagcgaccaagtattacaagtgt
gacgagctattcgcccatttggaggtgtggacaagtgtgagcgactccgaccgtcgcgac
atctacgaagatgtggttttcgccctcgctaaacgcgagaaagaggagggaaaagttcta
aagaagcgtaatatgaaaaaactcgctgaagttttagacagtatgacaaaaatcaactat
gatacgacatggagcgaagctcaggttcttctccttgctaacaatgcgttcaaaaacgac
gttaacctcctagctatggacaaagaggacgctcttatcgtcttcgaagagcatattcga
gtcctcgagaaggaatacgtcgaggagaaagaacgcgagaaaaagcgccagaagcgacaa
tgtcgcaaaaatcgtgaccagtttttggcccttttggaccacttgcatgaagaaggcaaa
ttgacttcaatgtccctttgggtcgagttgtatccaatcatttcggccgatattcgcttt
tccgccatgttgggccaacatggatctacgccactggatttgttcaagttttacgttgag
gatcttaaggcgcggtttcatgacgagaaaaaaatcatcaaggaaattttaaaagagaaa
aattttgaagttagagttgatacgagttttgatcagtttgcaactgtcatctgcgaggat
aagaaaagtgcaacactggacgccggaaacgtcaaattgacgtataattcgttgttggag
aaggccgaggcacgcgagaaggagcgcctcaaagaggagtcgaaacgtctcaaaaaattg
gagatgggtttcaaaaatctcctaagagagatgaatattgattttgagttgagttgggac
gaggtgaagccgaagattgagaacgaggaagaatatttggcgttttcgtgcgacagcgag
aggattaaaatttataaggacttccaacacgagatggaggagtcgtgcagccaccaccac
tccaggtcgaagaaatcgaagaagaagaaaagcaagaagtacaagtcctcgagtagcgat
tctgagagtgagaagaagaagaaacggcggtcgaggagcgagtcgaactcggatgacagt
gaagaggagtacaggaagaagaagtcgaagaagaagcacaagagaaagagcccttctagg
acaccatcagtggacaaacacattagtcgtagaccgtcagaaggcgatgcgattgtcggc
aagagtggtgaattgagtgagtctgagttagagaaacagagggcgctgttgttagcgcaa
ttgaaagagcctgaaagtgaatag
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