Tribolium castaneum (red flour beetle): 658625
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Entry
658625 CDS
T01046
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03030
DNA replication
tca03420
Nucleotide excision repair
tca03430
Mismatch repair
tca03440
Homologous recombination
tca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
658625
03420 Nucleotide excision repair
658625
03430 Mismatch repair
658625
03440 Homologous recombination
658625
03460 Fanconi anemia pathway
658625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tca03000
]
658625
03032 DNA replication proteins [BR:
tca03032
]
658625
03400 DNA repair and recombination proteins [BR:
tca03400
]
658625
Transcription factors [BR:
tca03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
658625
DNA replication proteins [BR:
tca03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
658625
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
658625
MMR (mismatch excision repair)
658625
DSBR (double strand breaks repair)
HR (homologous recombination)
658625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
DUF223
OB_MEIOB_N
IBR
Motif
Other DBs
NCBI-GeneID:
658625
NCBI-ProteinID:
XP_970093
BEETLEBASE:
TC004405
UniProt:
D7EJW6
LinkDB
All DBs
Position
LG3:complement(19773544..19780078)
Genome browser
AA seq
591 aa
AA seq
DB search
MKDKLTAGALLRIMKGQEVEEPLVQVLVSKKISSRSAETERYRIWASDGDYSITYGILTL
PPGKPVEDFSIIKLKKFVKSEISNAKGPQKILLIIDSEIVTPGHQIGVKIGEPVTLTDEI
IASETSSTPKVSTSEPPVKQPKSEQSTSLNQSISETRVLNQINALTPYHNKWVIKARVTN
KSDMRTWSNSRGEGKLFSFDLMDDSGEIRCTAFRDMADKYFNYLQVDKVYYISKCQLKAA
NKQFNTLKNEYEMTIGNETIIEECLTDDGHVPQVKYNFVPISALAEKEVGNLVDVIGICK
EASEVQTFTSKSTNRELRKREITLVDQSKTSIALTLWGSQADSFDATNNPVVVIKGAKVG
EFGGGKNLSTLMSSQIKLNPDIPECHRIKGWYDSEGQYDAMTNLSERVGGVGSFQTAWMS
LKEVQDKGLGHSEKGDYFQVKATILLVRSENALYKACPTDDCNKKVVDLENGMYRCEKCC
REFPNFKYRLLVSMNIGDFSGNQWVSVFSSEAEKILGKTAQEIGLTMRDDSEAGTAIFQA
ANFKQFIFKCRAKMENYNDEQRLKIVVVKVDPVNYEEYNGYLCEQIEALMV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaggataaactaacagcgggcgctttattgcgcattatgaaaggccaggaggtggag
gagcccctagttcaggtgctcgtgagtaagaaaatatcgtcacggtccgcagagaccgaa
cgttacagaatatgggcatctgacggtgactactctattacttacggtattttgaccctt
cctcctggcaaaccagttgaagatttttccataataaaattgaaaaagtttgtcaaaagt
gaaataagcaacgctaaagggccccaaaaaatacttctcataatagattcagaaattgtc
acacctggtcatcaaattggtgtaaaaattggcgaacctgtcactttaactgatgaaatt
atcgctagtgaaacttcatcaactccaaaagtttcaacctctgaaccacccgtgaaacaa
cccaagtctgaacaatcaacgtccttgaaccagtctatttctgagactagagttttgaat
caaattaatgccctcaccccttatcacaacaagtgggtgattaaggcaagagtcaccaat
aagtctgatatgcggacttggtcgaattcgagaggcgaaggcaagttgttcagttttgat
cttatggacgacagtggcgaaattagatgtacggcctttagggacatggctgataaatac
ttcaattatttacaggttgataaagtttactacataagcaaatgccaactcaaggcagct
aacaaacaattcaacaccctcaaaaatgagtacgaaatgaccattgggaacgagactatc
attgaagagtgcctcactgatgatggccacgtcccacaggtcaaatacaacttcgtacca
atttcagcccttgctgaaaaagaggttggtaatttagtggacgtgataggcatttgtaaa
gaagcgtccgaagtacagaccttcacttcgaaatcgaccaaccgcgaactgcgcaagcgc
gaaattacgcttgtcgaccaatcaaaaacttcgattgcgttgactttgtggggtagtcaa
gccgattcgttcgatgccacgaataacccggttgtcgtcatcaagggggctaaagtgggt
gaattcgggggtggaaaaaatttatcaacccttatgagcagtcagattaagttgaatcca
gatattcccgaatgccaccgaattaagggttggtacgattctgagggacagtacgatgca
atgacgaatttgagcgaaagggttggaggagttgggagttttcagacggcgtggatgagc
ttgaaggaggtgcaagataaagggttgggtcattcggaaaagggcgattattttcaagtt
aaagcaacgattttattggtgcggtcggaaaatgcgctgtataaagcgtgtccgactgac
gattgcaataaaaaagttgtggatttggagaatgggatgtacaggtgtgagaaatgttgt
cgtgaatttcctaatttcaagtatcggttgcttgtatcgatgaacattggcgattttagc
ggtaatcagtgggtgagtgttttttcgtcagaagcagagaaaattctaggaaagactgcg
caagaaattggtctcactatgcgagatgattctgaagctggcactgctattttccaggcg
gctaatttcaaacagtttatttttaaatgcagagccaaaatggaaaattataatgatgaa
caacggttgaaaattgttgttgttaaagtggatccagttaattatgaagagtataatggt
tatttgtgcgaacaaattgaagcattaatggtgtaa
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