Tribolium castaneum (red flour beetle): 658928
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Entry
658928 CDS
T01046
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
658928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tca04131
]
658928
Membrane trafficking [BR:
tca04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
658928
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
ANAPC4_WD40
zf-RING_2
Clathrin
zf_RING_Vps8
Beta-prop_HPS5
zf-RING_Vps41
zf-RING_11
zf_RING_Vps8_fungal
TPR_VPS8_2
zf-rbx1
zf-RING_5
zf-C3HC4_2
Beta-prop_EML_2
WDR55
UPF0730
zf-ANAPC11
Rtf2
Motif
Other DBs
NCBI-GeneID:
658928
NCBI-ProteinID:
XP_008191123
UniProt:
D6WDQ0
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Position
LG3:12868657..12882276
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AA seq
1170 aa
AA seq
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MGSESEEVLVEDSDDSLLDIRELNDLEFDIPSVAAPSLESVLWDMESEEGSDSASLHSFQ
SLTSKFRSMLCHRILQGVSTQVASAGERVGAGLPTVITNSLKYVAIGTSHGYVLNFDSEQ
NLCWCCYDTNSSDQGAVSALAFNLDSTRLLIGYERGFISMVDATSGDIIRKLPDAHAPQT
AVLHLRFTFLNNLALCGDSSGCVFSLSFNRRLGVRSWDSKCLFSGARGEVCVFEPLVQGH
DIHFLSHHILVAMATLSKVIVISIRPRLKVLFSQPLPRVSTSLPLISWQLVSVGRTFQPV
LAWGRCNELNYTRVVFHSTNNNRLRLLPLRNVQLNYTLTAMHWLGTRHLALLDTSENLRL
VEVRTQRELEVLELASAGLVYSSAHFKALAVGGGVSEAFALAGERACYNSLSSRGDQLLV
LGTKAVHLIKLRTWPERLLYLSEQGRWAEALNLAAEEGMNREIFTSSLLKKYLENLNQNT
VDKDSLTAAVNCCVKLNKTDILCNELLEAVSSDQSNQDWYYTLLTDHINNGLLTSMSPQV
AQTLVDYLEKKDAKVLENVLLSLDITCLDLHQALSICKKRKLYDAWIHITTKTIGDYASP
LTEFLAELTPDNHRLGNTILVYVSSCLAGLGYPSGHIPEKDVPRAKHEVLRCLETVHSMK
GSENEPSYPYLRALLKYNTRECLNVVGLAFTEAEFSGEMGLLQRQRLVQILTKIVIPPEF
SASQIINLACFIVRLVTSNNLNIDEAMLDTVIKSLTDFVDQPLSLRDHSEREQAWLDLLN
AGKLKFLSNKDLLHLALESKCYRVAEHLYEVLNDYSNILVCYLRDPVRKSDVFNYILNYI
TDAERSVEEQFVVNFRDLVATDSKKTSEVVVEHFPELIVQLSEIVDSAPDLQYAFLKGVV
SSDIKLPSELAEKYLELLCLKNPQEVCSYVQLSSCRIDKALAITKKHEVHAATALLLEQG
GEWTDALQLLLQHDMVDEAVNLCIRGAEHLDSDGAQKLWLALLQHNKSTRTMSLRQLLHA
AAPHVLPAQLLNLVSNASFGDVKVLLQGMLIDYVHDVQMFSTTLKLLSRDLHHELAKSLC
SNSRGISVTNVGCKLCQKPLVFRQELGGEQSIAVWGCGHCFHVTCLKVIENDTACPQCRM
QASQVPATQPVKKYTVETKTHARPDLEGHF
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggggtcagagagtgaagaagtgcttgtggaagattcggacgattccttgcttgacatc
agagagctaaatgatttggaatttgatattccatcggtggccgctccctcgctggagagt
gtcctctgggacatggaatcagaggaagggagtgacagtgcctcactacactcctttcaa
agtctcacatcaaaatttcggtctatgttgtgtcataggattttgcaaggggtctctaca
caagtcgcttccgccggggaacgcgttggtgccggcttaccaaccgtaataacaaatagt
ctgaagtatgtagcaatagggacttctcacggatatgtgttaaattttgattcagaacag
aatctttgttggtgttgttatgacaccaactccagtgatcaaggggctgtgtcagcttta
gcctttaatttagactctacaagactacttataggatatgaacggggctttatttcaatg
gtggacgcaaccagtggcgacataattagaaaattacccgacgcccatgccccccagacc
gccgtcttgcacttgcgattcacctttttgaataatttggcgctttgtggcgactcttca
ggttgcgttttttccctttcgtttaatcgccgtttaggagtacgcagttgggactcaaag
tgtcttttttcgggcgctcgtggcgaagtttgtgtctttgaaccgttggtccaaggccac
gatattcattttttaagccaccatatccttgttgccatggctacattatccaaggtcata
gtgatatcaattcggccccggctgaaagtcctgttcagtcagccgctaccgagagtttca
acctctctgccgttgatttcgtggcagttggtgtcggtgggacgaacgtttcagcccgtg
ctcgcatgggggcgctgcaacgaactgaactacacccgagttgtattccatagtacgaat
aacaatcgactgaggcttctccccttgcgcaacgttcagctgaactatactctgactgcc
atgcattggttggggacgcgccacttggcgttacttgacaccagtgagaatttgaggctg
gtggaggtgcggacgcagcgcgagttggaagttttggagttggccagtgctggactggtg
tatagttcggcgcattttaaagccctggctgtgggagggggcgtcagtgaggcgtttgca
ctggcaggggagagggcctgttacaacagtttatctagtcgaggggatcaattactagtt
ttgggtacaaaagctgtgcatttaattaaattaaggacgtggccggaacgacttttgtat
ctcagtgagcaggggaggtgggctgaggcgctcaatttggccgctgaagagggaatgaat
cgggaaattttcacctcaagtcttctaaaaaagtatttggaaaatctcaaccaaaacacg
gtggataaggacagcttaacggcggcggtaaattgttgcgtcaagttgaataaaactgat
atcctttgcaacgaacttctggaagccgtgtcaagtgaccaaagcaatcaagactggtac
tatactcttctaaccgatcacataaacaacggtttactaacaagcatgagcccgcaagtg
gctcaaactttagtggattatttagagaaaaaagacgccaaagtattagaaaacgttctc
ttatcgctcgacatcacttgtctagacctccaccaggcgttaagcatttgcaagaaacgc
aagctttacgacgcgtggattcacataacgactaaaacaatcggggattacgcgagccct
ttgaccgagttcctggccgaacttactccggacaaccaccgactgggaaacacaatttta
gtttacgtatcgtcatgcctagctggcctgggctaccctagcgggcatatccctgagaag
gacgtcccgagggccaaacacgaagtcctgcgctgtttggagacagttcactcgatgaaa
gggtcagagaatgagccctcttatccctacctgagggcgctgctcaaatacaatactcgc
gagtgtttgaacgtggtgggcttggcgttcaccgaagccgaattttcgggcgaaatgggg
cttttgcagcgacaaagactcgtacaaatactcacaaaaatcgtgataccgccagaattt
tccgcaagtcagattattaatttagcgtgttttatcgttcggttggtgacgtcaaacaat
ttgaacattgatgaagcgatgttggatacagttatcaagtcgttaacggattttgttgat
cagccgttaagtttgcgggatcatagtgagcgggagcaagcctggttggatttacttaac
gccgggaaattgaagtttttgtcaaacaaggatttgcttcacttagcgcttgagtcgaag
tgttaccgcgtggctgaacacttgtacgaagtattgaacgactattccaatatccttgtt
tgttatttgagagaccctgtgcgcaaatcggacgttttcaactacattctgaattacata
acggatgcagaacgtagcgttgaggaacaattcgttgtcaatttccgtgatttagtcgcg
accgatagcaagaaaaccagtgaagtggttgtcgaacatttccctgaacttatagtacaa
ttaagcgagattgttgattcagcccccgatttacaatacgcgtttctgaagggggtagtg
tcaagtgacatcaagctaccttcggaactcgccgagaaatatctagagctcttatgtttg
aaaaatccgcaagaagtgtgcagttatgtgcagctcagttcgtgtcgaatcgacaaagct
ctagccatcacgaagaaacacgaagtgcatgcggccacagccctcctcctggagcaaggg
ggcgagtggacggacgccttgcaactgttactgcaacacgatatggtcgacgaagctgtt
aatttgtgtatacgtggggccgagcatttggattcagacggggcccaaaaactctggctg
gcgttgttgcaacacaacaagagcactagaaccatgtctttgaggcagttattgcacgcg
gcggccccgcatgtgctcccggcgcagcttttgaatttggtgtccaatgcgagtttcggg
gatgttaaggttttgttgcaagggatgttgattgattatgtccatgatgtgcagatgttt
agcacgactttgaagctactcagtagggatttgcatcatgagttggcgaaatcgttatgt
tcgaacagtcgggggatttccgtgactaatgttggctgcaaattgtgccagaaaccgctg
gtctttcgtcaggagttgggcggtgaacaatcaattgcagtatggggctgtgggcactgt
tttcacgtcacgtgtctcaaagtgatcgaaaatgacacggcatgcccacagtgccgaatg
caggcgagccaagttccggccactcagccggtaaaaaagtatactgtcgaaacaaagaca
cacgcaaggcctgatctagaaggccacttttaa
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