Tribolium castaneum (red flour beetle): 659070
Help
Entry
659070 CDS
T01046
Name
(RefSeq) collagen alpha chain CG42342
Organism
tca
Tribolium castaneum (red flour beetle)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
659070
NCBI-ProteinID:
XP_008198674
LinkDB
All DBs
Position
LG10:3669486..3841144
Genome browser
AA seq
697 aa
AA seq
DB search
MEADPPRKSQGCAPRVGLGLVVCVLCVVSVYNGWRQVLLQDRVALLEERLRLVERRAVEG
ADVLVERFKREAADQLKRRVQRDVEARGVDRSEREAPECICPAGPPGPPGPPGPPGKRGR
KGKKGDVGDAGPPGSAGAPGKNGFPGDKGQKGDMGYMGPTGVRGFPGFPGPIGLDGPKGD
PGRPGDKGQKGDVGNPGFDVFQAVKGLKRSVTTLRGGTLGYAEIVAVKGEPGEPGPPGPP
GPPGSEGLPGHDGRQGIPGEPGPPGDRGEPGPMGPIGPPGIDGLQGPKGEKGDKGERGLT
TTVNGEFPTGLVEGPPGPPGPPGEKGESGPVGPPGLPGEKGARGRRGKRGRDGVALGQGP
PGPKGDSGEPGPKGDKGDKGFTGFPGPKGDMGLMGTPGEAGVNGEPGPQGPPGLPGQVGP
KGEKGEYGDIGPPGLMGPPGLPGPPGYPGQKGEKGEKGESKYKKLRRRQFQGDGTGEITT
GEVIMGPPGPPGPPGQNGLQGPPGIKGDRGMDGIKGEPGEKGAKGDPGPMGLPGPMGLRG
ESGRPGDYGKPGPMGPPGLDGMKGAQGEPGSKGERGDPGLPGTDGIPGQEGPKGDKGFKG
DSGPIGKRGRKGDKGDKGDQGVPGLDAPCPLGPDGLPLPGCGWRPPKEVIPPAPPAPVDF
DVEDPIDEGEDDYEEAEEDYEYPDQMNAALPVSASAI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggatccccctaggaagagccaggggtgcgcgccccgagtgggcctggggctg
gtggtgtgtgttctgtgtgtggtgagtgtgtacaacgggtggcggcaggtcctcctccaa
gacagagtggcgctgctggaggagcggctgcggctggtggagagacgcgccgtcgagggt
gcggatgtgctggtggagaggtttaagcgggaggcggcggaccagctgaagcggagggtg
cagcgggatgtggaggcacgtggagttgacaggagcgagagggaggctcccgagtgcatc
tgtccagcaggccctccaggccccccaggcccacccggcccgcccgggaagcgcggcagg
aagggcaagaagggcgatgtgggagacgccggccctccgggttccgctggggcgccgggc
aagaacggctttccgggtgacaagggtcagaaaggcgatatgggctacatgggtccgaca
ggggtgcgcggatttccgggatttccggggcctattggattagacggcccgaagggcgat
cctggccggcctggcgataagggacaaaagggcgatgtcggtaaccccggtttcgacgtg
tttcaggcagtcaaaggtttaaaaagatcagtaacgacgttacgcggaggcaccctgggc
tacgccgagatcgtagccgtgaagggcgaaccgggcgagccgggccccccagggcccccg
gggccgccaggctccgaaggcctcccaggccacgacggacggcaaggcattccaggcgaa
cccggccccccaggagacaggggcgaacccggccccatgggccccataggcccccccgga
atcgacggactccaaggaccgaagggcgaaaagggcgacaagggcgaacgagggcttacg
accactgtcaatggggagttccccacaggtttggttgaagggccaccaggaccaccagga
cctccgggtgaaaaaggtgaatccggacctgtaggcccccctggtttgcctggcgaaaag
ggcgcccgaggccggcgtggaaaacggggtcgagacggagtggcccttgggcaaggccca
ccaggtccaaagggtgactcaggtgaaccagggcccaaaggtgataagggcgataaaggg
tttaccggctttccaggtcccaagggcgacatgggcttgatgggaacccctggggaagcc
ggcgtcaacggcgaacccggccctcaaggccctccagggcttccgggtcaagtgggcccc
aagggcgaaaagggcgagtacggcgacataggccccccgggtctcatgggtccgccgggt
ctcccgggcccgcccggctaccccggacaaaagggcgaaaagggcgagaaaggcgaatca
aaatacaaaaagctgcgtcgaagacagttccagggagacggcactggggagataaccacc
ggggaggtgatcatgggccctccgggcccccctggccccccgggccagaacggcctccag
ggccctcctgggattaaaggggaccggggcatggatgggataaagggcgaaccgggcgaa
aagggcgctaagggcgatccgggaccgatgggtcttcctggtcccatgggtctgaggggc
gagagtggccgaccgggtgattatgggaagccagggccgatgggtccgcccggactcgac
ggaatgaaaggcgcccaaggggagcccgggagcaagggcgagcgcggcgaccccggcctg
cctggaactgacgggattccgggtcaagagggtccgaagggagacaagggtttcaagggc
gattctggtccgatcgggaaaaggggacgcaagggagataagggcgataagggcgaccag
ggggttcccggacttgacgccccatgtccgctgggacctgatgggcttccgctgccgggt
tgtggatggagaccaccgaaggaggtgattcccccggcgccaccggcaccagtcgacttt
gatgtggaggatccgatcgatgagggagaggatgactatgaagaagcggaggaagattac
gaatatcccgatcagatgaatgctgcacttccggtttccgcttcagccatttaa
DBGET
integrated database retrieval system