Tribolium castaneum (red flour beetle): 659082
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Entry
659082 CDS
T01046
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
659082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
659082
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
659082
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
659082
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
659082
NCBI-ProteinID:
XP_008191430
UniProt:
D6WH92
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Position
LG3:complement(26387346..26397190)
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AA seq
672 aa
AA seq
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MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASAEIKDKSVLMENRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEIQHWLVSSIDLLNIQTDTFECEIESLLANKKKKLDKDKQERMDELKSRLERHRFHIR
KLETLLRMLDNMSVEVSQIRRIKDNVEYYIECSQEPDFEDNEFIYDDIIGLDEVELSGVG
LPSSATTDSNETGGTPTSIISGSSPVTSPALGGQPYTHSSDSSNEADKKTIFKDALKPVK
PTAVRATSAMNSSTNSILSYSCNSTTSTPSSKPVLVSSTPSKQSAREASPVAQLNSTGNF
ATVAATTTASKVTATNGEPVMSSVITNNNQVQTQNNTAVVTSSHTQNSTNAHSTQNSNTV
SQKFNEQHVQNSSISPELNNSSRSSPMTNTEVQHIQMMNGPTTESNKIADGMSSLKTMAQ
QVIDRAGLESNQQQVILEANKIHNQEKSDAHIPPLLGVAPLGTIPLQKEHQAQFQLMEGA
YYHMPHPSDSEKVRTYLPRNSYPTPPYYIQTPLPHSDTVEFYQRLANETLFFVFYYMEGT
KAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINEEYEQGTYIYFDYEKWGQRKKEGFT
FEYKYLEDRDLN
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaccagaaaattacaaggagagatcgatcgatgtctcaagaaagtgactgaa
ggtgtggaaacgttcgaggatatctggcagaaggtccacaatgccactaacagcaaccag
aaagagaaatacgaagccgatctcaagaaggagattaagaagctgcaaaggcttcgagac
cagattaaaagttggatagcttcggccgaaatcaaggataaaagtgttcttatggaaaac
cgaaagttaatagagactcaaatggagcgattcaaagtggttgagagggaaaccaagaca
aaggcgtactcaaaagagggcttgggggcggcgcaaaagctcgatccagcgcaaaaggaa
cgtgaagagatccagcattggttagtttcgtccatcgacttgttaaacatccaaacggac
actttcgaatgcgagatcgagtcgttgttagcgaataagaaaaagaaactcgataaagac
aaacaggagcgaatggatgagctgaagtcgcgcttagaaaggcacaggtttcacatacga
aagttagaaactttgttacgtatgctcgataatatgtcggtggaagtttcgcaaatacga
aggataaaagacaacgtcgaatattacatagagtgttcgcaagagcccgatttcgaggat
aacgaattcatttacgatgacatcattggcttggatgaggtcgagttgtcgggcgtgggg
ctgccgtcgtctgcgacgacggatagcaacgaaacgggcggaacaccaacttcgattatt
tcgggatcgtcacctgtgacctcgccggcgttagggggacaaccctacacccattccagt
gatagttcaaatgaagctgataagaaaaccattttcaaagacgcgcttaaacctgttaaa
ccaactgctgtccgagcgacgtccgccatgaacagtagtaccaactctatcctgagctat
agttgcaatagtacgacctcaacacctagcagcaaaccagttctagtaagtagtactccc
agcaagcaatcggctcgagaagcatcaccggtggcgcaattaaattcgaccggaaacttt
gccacagttgctgcaacaacaacagcgtcgaaagtgaccgcaactaatggggaacccgtc
atgtcttctgtgataactaacaataatcaagttcaaacgcaaaacaatacggccgtcgta
acgtcgtcgcatactcaaaattcgacaaatgcgcactcgacgcaaaactcaaacaccgta
tctcagaaattcaacgaacaacatgtgcaaaatagtagtattagtcccgaacttaataac
agcagcaggtcctcgccaatgactaatacggaagtacaacacatacagatgatgaacgga
ccaacgaccgaaagtaataagattgcggacggcatgtcgtctctgaagacgatggcgcag
caggtgatcgaccgcgcgggcttggagagcaaccagcagcaggtgattttagaagcgaac
aaaatccataatcaggagaaatcggacgcgcacatccccccgttattgggggtggcgccg
ctcggaacgataccgctccaaaaagagcaccaggcgcagttccagctcatggaaggtgcc
tattatcacatgccacatccatccgattccgaaaaagtaagaacttacttgccaaggaac
tcatatccaacaccaccttattatatacaaacaccattaccacattccgataccgtggaa
ttttatcagcgtttggcgaacgaaacattattttttgttttttattacatggagggcaca
aaagctcaatatttggccgcgaaagcgcttaaaaagcaaagttggaggtttcatacgaag
tatatgatgtggttccagaggcacgaagagcccaaaattattaacgaagagtacgaacag
ggaacttacatttacttcgattatgaaaagtggggccaacgaaaaaaagaaggatttacc
tttgaatataagtacttagaggatagagacctgaactga
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