Tribolium castaneum (red flour beetle): 659215
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Entry
659215 CDS
T01046
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03020
RNA polymerase
tca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
659215
09124 Replication and repair
03420 Nucleotide excision repair
659215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
659215
03400 DNA repair and recombination proteins [BR:
tca03400
]
659215
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
659215
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
659215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
659215
NCBI-ProteinID:
XP_970635
BEETLEBASE:
TC010438
UniProt:
D6WKM1
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All DBs
Position
LG5:7318777..7319872
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AA seq
274 aa
AA seq
DB search
MPYANQPSVHITDLTDDNVKFYIEDTDLSVANSIRRVLIAETPTLAIDWVKLEANSTVLS
DEFLAHRIGLIPLISDDVVQRLQYPRDCICTDFCHECSVEFTLDVKCTDDHTRHVTTADL
KSSDPRVIPATSKHRDDESSEYGDTDEILIIKLRKGQELKVKAYAKKGFGKEHAKWNPTA
GVAFEYDPDNAMRHTLFPKPDEWPKSEYSELDEDQYEADFNWELKPNKFYFNVEAAGALK
PENIVIMGVAMLKDKLSNLQTQLNHEVQNDALAI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgcaaaccagccctcggtccacataaccgatttaaccgacgataatgtgaaa
ttctacattgaagacaccgatctgagcgtggctaacagcatcaggcgcgtcctaatcgcc
gaaacgccaactttggccatcgattgggtcaagttggaggcgaactcaaccgtcctaagt
gacgaatttttggcccacagaataggcttgatccccctcatatcagacgacgtggtgcaa
cgtctccaatacccaagagactgcatttgcaccgatttttgtcatgaatgcagtgttgaa
ttcacccttgatgtgaaatgcactgacgaccacacgcggcacgttaccaccgcagattta
aaatcgagcgatcctagagttattccggccacttccaaacacagggacgatgaatcgtca
gagtatggcgacactgacgaaattctgatcatcaagttgcggaaagggcaagagttgaag
gttaaagcttacgctaaaaaggggttcggtaaggaacacgccaagtggaaccccacggcg
ggggtggccttcgagtacgaccccgataatgctatgagacacacgctttttcctaagcca
gacgaatggcccaagagcgaatacagcgaactggatgaggatcaatacgaggctgatttt
aactgggaattgaaaccaaacaagttttatttcaatgtggaagctgcaggagccctaaaa
cccgaaaatatcgtcataatgggggtggcaatgctgaaggataaattgtccaatttgcag
actcagcttaatcatgaagtacagaacgatgcccttgctatttaa
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