Tribolium castaneum (red flour beetle): 659256 Help Entry 659256            CDS       T01046                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism tca  Tribolium castaneum (red flour beetle) Pathway tca03018   RNA degradation Brite KEGG Orthology (KO) [BR:tca00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     659256  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tca03019]     659256 Enzymes [BR:tca01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      659256 Messenger RNA biogenesis [BR:tca03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      659256   mRNA degradation factors    3'-5' decay     Ski complex      659256 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel DEXQc_Suv3 Helicase_C ResIII MTR4-like_stalk Taeniidae_ag ATPase_2 Phage_int_SAM_6 DtxR CCDC61_coil Motif Other DBs NCBI-GeneID:  659256 NCBI-ProteinID:  XP_008195520 UniProt:  A0A139WFJ1 LinkDB All DBs Position LG7:4853090..4857899 Genome browser AA seq 1209 aa AA seqDB search MSDVNIDIEPPPILPDITDELRDYLICPERLPIHRYETNQEFWPRTPDLKELLFFEESPL CTTLKVQRDPNTGEIIEFREIPIQSAGANATNSMSLTRQPAPPSEATRGNASFIPFWPAS FPDPVSQLPKQELLDTELLTVPPGFTRGIVFASDGRTVLSKETPREKESVEVPANVVNLF EIIQEDPNFFGTLENANIKKPDDISEHKQRETLPEEEEVLPNDPPILKISTVPPPTEFKS TEWAILLDTSKPVKDFKERIPEMAYEFPFELDTFQKLAILQLEQHNHVFVAAHTSAGKTV VAEYAIALSQKHMTRTIYTSPIKALSNQKYRDFKKEFKDVGLITGDFQINQTASCLIMTT EILRSMLYCGSDITRDLEYVIFDEVHYINDRERGHVWEQVLILLPAHVCVVLLSATVPNT IEFADWLGRTHQRKVYVITTYKRPVPLLHFLYTGTGGASRDNRYLVLNSEGWKMGGYAAA VASLPKVDPKSAYPQAKSQYYNFTPKQEKVLWNGLVDHLNRKNLLPIVAFTFSRAKCDQN AENLMSLDLTTQKEKAQIHMFFEKCVRSLKEPDRNIPQILRMRNILHKGIGVHHSGVLPI IKEIVEMLFQKGLIKLLFATETFAMGVNMPARTVVFDSITKHDGQERRNLKPAEYIQMAG RAGRRGLDSEGTVIILCKNKIPKVEELQAMMLGTPNVLQSQFRLTYGMVLSLLRVESLSV EGMMSRSFREADHQKKMVDKQNELLEVEKEIRDLCTQELSSYLQPLVKFYNCASSYLEAR KKCLDNVMSSPKLIKVLTPGRIILITHKSHVNKLALLLSIVRGKKPTYKVLVLTDSKPEI KEEKNDLWYKMIGLASDNIYAPGSSPGHAILTIPTEDIFEITHKTVKVDTDLVIKDWEKR QIERFRNDPVGQTCQQAIQELHKFTISVNEAKNQEKLSYLHLIQDLKVNEHQIHDDLQVV YKFKDILIDHLPSTQIPNFEQQFASVFTRTFLERKRDDLKHYLSSASLSLYPDYENRIEL LRTLKYVDLQNRVQLKGRVACEMGMNELLITELVLRNILTKLQPAEVAALLSALVFSPKK DNREEETVHITDDLTKAMKEMQNIHQEIAKLEMNLDIKTDEFQNDLNFALIEIVYEWASA KPFADIMCLTDIQEGIIVRCIQQLNDTICDVRNAARIIGDPELQNKMEEASAAIKRDIVF AASLYTNDL NT seq 3630 nt NT seq  +upstreamnt  +downstreamnt atgagtgacgttaatattgatattgagcctccccctatcctccctgacataactgacgag ttgagggactacctcatatgccctgagaggctccccatccatagatatgaaacgaatcag gagttttggcctcggacacccgatttaaaagagttacttttctttgaggagtctccttta tgtacgactttgaaggtgcaacgtgacccaaacactggagagataatagaatttagggaa attcccatacagtcagcgggtgcaaacgccacaaattccatgtctttgaccagacaacct gcgcccccttcggaggccacaagggggaacgcctcttttatccccttttggccagctagt tttcccgatcctgtgtcacagttgcccaaacaagaactattagacacagaattactaact gtccctcctggtttcacacgcggcattgtttttgcaagcgacggcagaacagtcttatcg aaagaaactccaagagaaaaagaatcagttgaggttcctgccaacgttgtcaatctattt gagataattcaagaggatccaaacttttttggaacgctcgaaaatgcaaacattaaaaaa cctgacgacatttccgaacataaacaacgcgaaacgctccctgaagaagaagaagttttg cctaacgacccccctatcctaaaaatcagcaccgtaccgccccctaccgaattcaaaagc acagaatgggcaatccttctcgacacttcaaagccagtcaaagatttcaaagagcgaatc ccggaaatggcctacgagttcccgtttgaattagacacgttccagaaattggcgattttg caactcgagcaacacaatcacgtgttcgttgctgcgcacacctcggccggcaagacagtc gtggctgagtacgcaatagccctctcgcaaaaacacatgacccggaccatatacacaagc ccgattaaggcgctctccaaccaaaaataccgcgattttaaaaaggaattcaaagatgtt ggtttgataactggtgatttccaaatcaaccaaaccgcctcttgcttgataatgaccacg gaaatcctccgttcgatgttgtactgcggaagcgacataacgcgcgacttggagtacgtt attttcgacgaagttcactacattaacgacagggaacggggccacgtctgggagcaagtt ctgatcctgctccctgcacacgtttgcgtggttctactgagcgcaacggtccccaacacc atcgaatttgccgactggttgggccgaacccatcagagaaaagtctacgttattacaacg tacaaaagaccggtgcctttactacattttttgtatacgggcaccgggggcgcgtctcgg gacaaccgctacttggtcctcaattcagagggctggaaaatggggggctatgccgcagcc gtggcctccttgcctaaagtcgacccgaaatcggcatacccgcaagccaagtcgcaatat tacaactttacgccgaagcaggaaaaagtgctatggaacggtttggttgatcatttgaat cgaaagaatttgttgccgattgtggcgttcactttttcgagggctaaatgcgaccaaaat gccgagaatttgatgagtttggatttgaccactcagaaggagaaagcgcagattcatatg tttttcgagaagtgtgtcaggagcttgaaggagccggacaggaatattccgcagattttg aggatgaggaatattttgcataaagggattggggtgcaccacagtggggttttgcccatt attaaggagattgtggagatgctgttccagaagggcctgatcaagttgctgtttgctact gaaaccttcgctatgggggtcaacatgcccgctcgaaccgtggtgttcgactcgataacg aaacacgacggacaagaacgacgaaacctgaaacctgccgaatatattcaaatggctggg cgagcaggtcgtcgaggtctggacagcgaaggcactgttataatcctttgcaaaaataaa attccaaaagtggaagaactccaagccatgatgttagggactcccaatgttttgcaaagc cagttccgactgacttacggaatggtcttgagtttgcttcgcgttgaaagcctaagtgtt gagggtatgatgagtagaagtttccgcgaagcggatcatcagaaaaaaatggtcgacaaa caaaacgaattgttagaagtcgagaaggaaatacgagatttgtgcacacaagaattgagc agttatttgcaaccgttggttaagttctacaactgtgcttcgtcttatttagaagcgcgg aaaaagtgtttggacaatgttatgtcatcacctaaattaattaaagtgctaacgcctgga cgaatcattctgataacacacaagtcacacgtgaacaaattagctttgttattatcaata gttcgaggcaaaaaaccgacttacaaggtcctagttttaaccgactcaaaaccagaaata aaggaagaaaaaaacgatctttggtataaaatgataggcctggccagtgacaacatttat gcccctggaagctcacccggacacgcaattttgacgatcccaacagaagatatcttcgaa ataacgcacaaaactgtgaaagtcgacacagatttggtgatcaaagactgggaaaagcga caaatcgagcggtttcgcaacgacccggttggacaaacgtgccaacaggccatccaggag ttacacaagtttacaatttcggtgaacgaggcgaaaaatcaggagaaattgtcgtatttg cacctgattcaggacttgaaagtgaacgaacaccaaattcacgacgatctccaagtcgtg tacaaattcaaagacatattaattgaccacttgccaagcacccaaattcccaatttcgag caacagttcgcgtccgtgttcacgcgcacgtttttggagcggaaaagggacgacttaaag cactatctttctagtgctagtctctccttgtacccggactacgaaaatcggatcgaactt ttgaggactttgaaatatgttgatttgcaaaatagagtgcagttgaaaggacgtgttgcg tgcgagatgggcatgaacgaattgttgattacagagttggtgttgaggaatattttaacg aagcttcaaccggcggaagtcgccgcgttgttgtccgctttggttttttcccctaaaaaa gataatagggaagaggagactgttcacataactgatgacttaacaaaggccatgaaggag atgcaaaatattcatcaggaaattgccaagttggaaatgaatctggacatcaaaacggat gagtttcaaaatgacttaaattttgctctgatcgaaatagtgtacgagtgggcttccgca aagccgtttgccgatattatgtgtttgaccgacattcaggaaggtattattgtacggtgt attcagcagttgaatgatacaatctgtgatgtaagaaatgccgcaagaataatcggagat cccgaattgcaaaataaaatggaagaagcttcagctgctattaagcgtgatattgttttt gccgccagtttgtacaccaacgatttataa

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