Tribolium castaneum (red flour beetle): 659526
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Entry
659526 CDS
T01046
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
659526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
659526
Enzymes [BR:
tca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
659526
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
659526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
659526
NCBI-ProteinID:
XP_970918
UniProt:
D2A5Z9
LinkDB
All DBs
Position
LG6:complement(3576072..3594466)
Genome browser
AA seq
1619 aa
AA seq
DB search
MSRNIRKHDTGPKHLSFDSVVFSMFTKEEIKKLCITKICTPLTLDPLGHPLSGGLYDKSL
GPMTEKSEPCGTCRKNLYFCPGHFGYIELPLPVVNPIFYRMIGTILRMACLSCFRFQIPE
HVKYSITLQIRLLNCGLVTEAVEIANSIALLILVHESLENIPEDVVLPIRKYETLAQEMQ
EKLNGEYVLTKNTETLRNQFVNEMLREVKARETCMHCKHSMEKVQVLRNKIILSKKRNVA
KGSTEVLGKVKAFEAKYVTPDESRTYMRNIWKEEKELMREIIAVLGGVEGEHPTDVFYWD
VIPVIPPNMRPVNIVNSRVSEHPTSQLYKNIIHNTILLRLIIQVVKNKGDLGSLPPEAKG
AYNVSKGSSPIEKLNLAWESLQSEVDSLIDTTYIRNANVAGLKQIIEKKTGIIRMHMMGK
RVNFSARTVITPDPNLNIDEIGIPEVFAKHLTYPVPVTSWNVEELRKMIMNGPDVHPGAV
MVEYEDGTIKRINTNNTTQQESILKRLLTPDKIVGFRGVKRVHRHLCNGDVLLLNRQPTL
HKPSIMAHTARVLKGEKTFRLHYANCKAYNADFDGDEMNAHFPQNELARSEAYNLVNVCN
QYLVPKDGTPLSGLIQDHMIAGVKLSLRGRFFNEVDYKHFVFQALANKTGKIILLPPAII
KPCQLWSGKQILSTVFINIIPEGHERINLTASAKISAKAWQTAPPRKWKGGGSRFVNPNT
MSEAEVVIRGGELLVGVLDKTHYGATPYGLVHCMYELYGGVYATGLLSALAKLFTRFLQK
EGFTLGVHDILTVEKADQRRRQIIEGARKIGLDVITTALDMPRDSPIEEIVDKIRENSVK
NPKWRATVDRQYKTALDSFTNDINKTCLPAGLVLKFPENNLQLMVQSGAKGTTVNTMQIS
CLLGQIELEGKRPPVMISGKSLPSFPIFEFAPRAGGFIDGRFMTGIQPQEFFFHCMAGRE
GLIDTAVKTSRSGYLQRCLIKHLEGLTVGYDLTVRDSDKCVIQFLYGEDGMDISKLQFLN
SKQLVFLADNSKGMIDKKALKMLKDEHQKSVKAHKQQLADWCEKFGHPLQRERKSPFSLF
SSVVRAKTKGTDFGTKEMTKLWKKADKDIKDSFRQQCIPCPDPVNSIYQPDHHFGSLNEK
LEELMNTYQSTNKKQTKQFQNMLKLKAMRSLCAPGEPVGLLAAQSIGEPSTQMTLNTFHF
AGRGEMNVTLGIPRLREILMMASKNIKTPSMEIPFLPVENLEEKAEDLRKMLTRVVVADV
LEKVDVTVELNVEPVRQHRYTLRFQFLPRKYYKNDFYVGPKYILKHMTRKFFGEMFTAIR
KLSKVTSNLVMMDEEKRQKASNDDEEETNDADANEDSSDEEPEDTEDAKTGNKFKQIHDD
QEPEESEREDSGDEDTETAPPVDDKTNEAVVESYNFAQNYIYDTKKHHWCEITFGLPLEF
KKLDLTAILRDVAAKSVLWETPNIKRAITYMKNDVLTLRTDGINILEMSKYHALLDLNRL
NCNDIHKMAETYGIEAAMKIIVKEVQDVFNVYGIKVDPRHLSLIADYMTFNGTFEPLSRK
GMESSASPLQQMTFESSLTFLRNATIGGKRDNLTNPSSCLMVGKPCVTGTGCFEVLHKM
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaaacatccgcaagcacgacacgggccccaaacacctgtctttcgactcggtc
gtgttctccatgttcacgaaagaagagatcaaaaaattgtgcattacgaaaatatgcacc
cccttgactttggaccccttggggcacccgttgtccggcggcctctacgacaagtctctg
ggccccatgaccgagaagagcgagccgtgcggcacttgccgcaaaaacctttacttttgc
ccggggcatttcgggtacattgagctgcccctgcctgtggttaaccccattttttaccgc
atgattgggactattctgcggatggcttgcctgagttgtttccggtttcaaattcccgag
catgtgaaatattcaattacgctgcaaattcggcttttgaattgcgggctggtcacggag
gctgtggaaattgccaatagcatagcactgttgattttggtgcacgagtcgttggagaat
attcctgaagatgtggttttgccgattcgaaagtacgaaacgttggctcaggagatgcaa
gaaaaattgaacggggaatacgttctaacgaaaaatactgagactttacgcaatcagttt
gtgaacgagatgttgcgcgaggtgaaggcgagggagacttgtatgcactgtaaacattca
atggaaaaagtgcaagttttgagaaataagattattctctcgaagaagcgaaacgttgcc
aaggggagtacggaagttttggggaaagttaaggcttttgaggcgaaatatgtgactcct
gatgagtcacggacttatatgagaaacatatggaaggaggagaaggaattgatgagggaa
attatcgccgttttagggggggtggagggagagcaccctactgatgttttttattgggat
gttattccggtgattcccccaaatatgagacccgtcaatattgttaatagtcgtgttagt
gaacatccgacttcgcaattgtataaaaatattattcataatacaattcttctgagattg
attattcaagtggtgaagaataagggggacttgggtagtcttccacccgaagctaagggc
gcctacaacgtatccaagggcagctctcccatcgaaaaactgaacctagcctgggaatcc
ctccaatccgaggtcgactccctcatcgacaccacctacatccgcaatgcaaacgtcgcc
ggtttgaaacaaatcatcgaaaagaaaaccggaatcattcgcatgcacatgatgggcaaa
cgtgtcaatttctccgcccgtaccgtcatcacacccgaccccaacctcaacattgacgaa
atcggcattccggaagtttttgccaaacatctgacgtatcccgtacccgtgacgtcatgg
aacgtcgaagagttgcgcaaaatgataatgaacggaccggacgtacatccgggcgctgtc
atggtcgaatacgaagacggaacaataaagcgtataaacacaaacaacacaacccaacaa
gaaagcattctgaaacggcttctaacgcccgataaaatcgtgggcttccgtggcgtcaaa
cgcgtgcatagacacctatgcaacggcgatgtgcttttgttgaatcgacagcctactttg
cacaagccgagcataatggcacacacggcccgtgttttaaaaggggagaaaacgttcagg
ttacattacgccaactgtaaggcgtacaacgccgactttgatggcgacgaaatgaacgca
catttcccccaaaatgagttagcacgtagcgaagcttacaacttagttaacgtttgtaac
caatatctcgtaccaaaagatggcactcctttaagtggccttatccaagatcacatgatc
gcaggagtgaaattatcactccgggggcgatttttcaacgaagtcgattacaaacatttc
gttttccaagctttggcaaacaaaactggaaaaatcatcctattaccaccggcaatcata
aaaccgtgccaactatggtccggtaaacaaatcctctcgactgttttcattaacataatc
ccggaaggccacgaacgcattaacttgacagcgagtgcgaaaatcagcgctaaggcgtgg
cagacggccccgccccgcaaatggaaagggggcggttcccgttttgtgaaccccaatacg
atgagcgaggccgaggttgtgattcgcggcggcgagttgttggtgggcgtgttggacaag
acgcattatggggccacgccctatgggcttgtccattgcatgtacgagttgtacgggggc
gtgtatgcgacagggctgttgagcgcattggctaaactcttcacgaggtttctgcaaaag
gaggggtttactttgggcgtgcatgatatcttgacggtggagaaggcggaccagaggcgg
cgccaaatcatcgaaggggcgcggaaaatcggccttgacgtgatcacgaccgcgctcgac
atgccccgagactccccgatcgaggaaatcgtcgacaaaatccgagaaaatagcgtcaaa
aaccccaaatggagggcaacggttgaccgacaatacaaaacggcactagattcattcacg
aatgatattaacaagacttgtttaccggctggtttagtgttaaaatttcctgaaaataat
ctccagttgatggtacaatcgggcgctaaaggcacaacagtcaataccatgcaaatttcg
tgtcttttgggccaaattgagttggagggtaaacgcccccctgtcatgataagcgggaaa
tcgttgcccagttttccaatttttgagtttgcgccacgtgctggtggttttatcgatggc
aggtttatgactgggatccaaccccaagagtttttcttccattgtatggcaggtcgtgag
gggttgattgatacagctgttaaaactagtcgtagtgggtatttacagaggtgtttgatt
aaacatttggaaggtttgacggttggctatgatttgacagttcgtgatagtgacaagtgt
gtcatccagtttctgtatggcgaagatggaatggatatttcaaaattgcaatttcttaat
tcgaaacagttggtctttttggccgataacagtaaaggtatgattgataagaaggcactg
aagatgttgaaagatgaacatcagaagtcggttaaagctcacaaacaacaattggccgat
tggtgtgaaaaattcggacacccgttacagagagaacgaaaaagtccgttttctttgttt
tcgtctgtggtgcgtgctaagaccaaaggaacagattttggtacgaaggaaatgaccaag
ttgtggaaaaaggccgacaaagacataaaagatagcttccgtcagcagtgcatcccctgc
cccgaccccgtcaactccatctaccaaccggaccaccacttcggttccctcaacgaaaaa
ctcgaagaattgatgaacacttaccaatccaccaacaaaaaacaaaccaaacaattccaa
aacatgctaaaactcaaagctatgcgttcactgtgcgctcccggcgaacctgtcggcctc
ctcgcagcgcaatctatcggcgaaccttccactcagatgaccctcaacacgtttcatttc
gccggcagaggcgaaatgaacgtcaccttaggtataccacgtctgagggaaatcctgatg
atggcgtcgaaaaacatcaaaacgccctcaatggaaatccccttcctgcctgtggaaaac
ctggaggagaaggcggaggatttgaggaaaatgttgacaagggtcgtagttgccgacgtt
ttggaaaaagttgatgtcacagttgaattaaatgttgagccggtcaggcaacataggtac
actctgaggttccagtttttgccccggaagtactacaagaacgatttttacgtcggaccg
aagtatattttgaagcacatgacgcgcaaattcttcggcgaaatgttcacagcgattagg
aaactgtccaaagtgacctcaaatttggtaatgatggacgaggaaaagcgtcaaaaagcg
tcaaacgacgacgaggaggaaacaaacgacgcagacgcgaacgaagacagttccgacgag
gagccggaagacaccgaagacgcgaaaacgggcaacaagttcaagcaaatccacgacgac
caagagccggaagagtccgaacgcgaagactccggggacgaggacaccgaaacggcgccc
cctgtggacgacaaaacgaacgaagcggtggttgaaagctacaatttcgcgcaaaactac
atctacgacacgaaaaaacaccactggtgcgaaatcacattcggacttccgctcgaattc
aaaaaactcgacttgaccgccatcttgcgtgacgtcgccgcgaagtccgtgttgtgggaa
acccccaatatcaagagggctattacctacatgaagaatgatgttttgaccttacggacc
gacggtattaatattttggaaatgtcgaagtaccacgccctcttggatttgaaccgtttg
aattgtaatgatatacacaagatggcggagacttatgggattgaagccgccatgaaaatt
atagtgaaggaggttcaggacgtgtttaatgtttatgggattaaggtcgatccgcgccat
ctgtcgttaattgccgattatatgacgtttaatggcacgtttgaaccgttgagtcgtaaa
gggatggaaagtagtgcctcaccgctccaacagatgacgttcgagtcgtcgctcactttc
ctacgtaatgctacgattggtgggaaaagggacaatttgaccaatccgtccagttgtttg
atggttggaaaaccatgtgtgacagggacgggttgttttgaggtgttgcacaaaatgtga
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