Tribolium castaneum (red flour beetle): 659720 Help Entry 659720            CDS       T01046                                  Name (RefSeq) cysteine protease ATG4D   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism tca  Tribolium castaneum (red flour beetle) Pathway tca04136   Autophagy - other tca04140   Autophagy - animal tca04145   Phagocytosis Brite KEGG Orthology (KO) [BR:tca00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     659720    04140 Autophagy - animal     659720    04136 Autophagy - other     659720  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:tca01002]     659720   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tca04131]     659720    03029 Mitochondrial biogenesis [BR:tca03029]     659720 Peptidases and inhibitors [BR:tca01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    659720 Membrane trafficking [BR:tca04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     659720 Mitochondrial biogenesis [BR:tca03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     659720 SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  659720 NCBI-ProteinID:  XP_008193420 BEETLEBASE:  TC014208 UniProt:  A0A139WNQ2 LinkDB All DBs Position LGX:3197987..3205504 Genome browser AA seq 428 aa AA seqDB search MNTQDEGNNSDVEGKVKNRLLSMWNNVKYGMKLKTNFSKESPVWLLGKCYRRIESPSSDS TELGTDVAAFQSQSEIASSDDEGFEGFKKDFISRLWLTYRREFPILNGSNYSSDCGWGCM LRSGQMLIAQALVCHILGRDWRWQPDHQPTTRESFIEVVNHRKIIKWFGDKPSRNSPFSI HTLVALGEASGKKAGDWYGPGFVAHLFRQAFKRASEDNYEFDSLTVCVAQDCAVYIKDVM EECTDKNGKWKSLILLIPVRLGAEKFNSIYAPCLTTLFSLKQCIGIIGGRPKHSLYFVGY QDDKLIHLDPHYCQEVVDVWAVDFPLTSFHCRSPRKIHLSKMDPSCCIGFYCPTKESFFN LIEIVQPLVIPPGRTDSPGSEYPMFIFCDGYSRDAQLSPKKLPPSELEYSMDSSTDGDDM GTEAFEIL NT seq 1287 nt NT seq  +upstreamnt  +downstreamnt atgaacacacaggatgaagggaacaattcggacgtcgaaggcaaagtcaaaaacagactc ctctcaatgtggaataacgtgaaatatgggatgaagctcaagacgaacttctcgaaagaa tctcccgtctggctcttgggcaagtgctaccgcaggatcgaaagtccctcctctgacagc accgagctcgggaccgacgttgcagccttccagagccagagcgagatcgccagtagcgac gacgaaggcttcgaaggattcaaaaaagacttcattagcagattatggctaacatatcgg cgcgagttccccattctgaacggctccaactacagcagcgactgcggctggggctgcatg ctgcggagcgggcaaatgctgatcgcccaagccctagtctgccacattctgggcagggac tggcggtggcagcccgaccaccagcctacgacgagggagagtttcatcgaggtggtgaac caccggaaaattatcaaatggttcggcgacaagccctccaggaacagccccttttccatc cacacgctcgtggccttgggcgaagcctcgggcaagaaggccggcgactggtacggcccc gggttcgtcgcgcacctctttcggcaggcgttcaagcgcgcctctgaggacaactacgag ttcgattcgctgacggtgtgtgtggcccaagactgcgcagtttacattaaggatgtgatg gaggagtgcacggataaaaacggcaagtggaaatctctgattttgctgatcccggtccgg ttaggggccgagaagttcaactcgatttacgccccctgtctcacgaccctgttcagcttg aagcagtgcataggcataatcggggggcgccctaaacattccttgtacttcgtaggttac caagacgataagttgattcatttggacccgcattactgccaggaagttgtcgatgtttgg gcggttgattttcccttgacgagtttccactgtaggtcgccgcggaaaatccacttaagc aaaatggatccgtcttgttgtatcggattttattgccctaccaaagagagtttttttaat ctcattgaaattgtccagcctttggttattcctcccggacgaactgatagccccggcagc gaatatcccatgttcatattctgtgatgggtacagccgtgatgcccagttgtccccgaaa aaattacctccatctgagttagaatattccatggatagtagcactgacggcgatgacatg ggcaccgaggcgtttgaaatactgtag

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