Tribolium castaneum (red flour beetle): 659785
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Entry
659785 CDS
T01046
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
659785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
659785
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
659785
U7-dependent histone pre-mRNA processing factors
659785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
659785
NCBI-ProteinID:
XP_008193780
UniProt:
D6WP71
LinkDB
All DBs
Position
LG7:complement(6522955..6527857)
Genome browser
AA seq
733 aa
AA seq
DB search
MTSIIKLQALSGAMDESPPCYILQVDEVRILLDCGWDEHFDMEIIKEMRRHVHTIDAVLI
SYPDVAHLGALPYLVGKLGLNCPIYATIPVYKMGQMFMYDLFQSHYNMEDFDLFTLDDVD
ATFEKVIQLKYNQSVPLKGKGYGLTITPLPAGHMIGGTIWKIMKVGEEDIIYANDFNHKK
ERHLNGCELEKLQRPSLFITDAFNATYQQARRRARDEKLMTNILQTLRNNGNVLVAVDTA
GRVLELAHMLDQLWRNKESGLLVYSLALLSNVSYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLQLCHSLHELQKVSSPKVVLASSPDMESGFSRELFLQWCSNPNNSIIITTRTS
PGTLARDLVDNGGNRQIDLVVKRRVKLEGSELEEYQKSQREKREENSSRDEESDSDDDIE
MSVISKGRHDIVIKQEGKTSGGFFKVTKKQYPIYPFHEEKIKCDEYGEIIKPEDYKLADV
VTETEDNKENVVIKKEEEVIPEVAETPSKCIVLSRTVQVNCQVQYIDFEGRSDGESLMKI
LSQLRPRRVIIVRGSPESTNTIKNHCQENLDARVFAPVRGEVVDATTETHIYQVRLTDAL
VSQLNFQKAKDAEVAWLNAQIVVRESQLDARRMNVDNEPMEVDEEESKILTLEPYGDNIP
HDTVFINELKLSEFKQILAKSNINSEFSGGVLWCSNGTLAIRRVETGRVILEGCISEDYY
KVKELLYEQYAVL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaataatcaaactgcaggccctgtcgggggcaatggacgagtcgcccccttgc
tacatcctgcaagtcgacgaagtgcgtattttactggactgtggatgggacgaacatttc
gatatggaaattatcaaagaaatgagaaggcatgttcacacgattgacgccgtcttgatt
tcgtaccctgatgtggcgcatttgggggctcttccatatttagtcggaaagttgggcttg
aattgccctatttatgccacaataccggtctataagatggggcaaatgtttatgtatgac
ttgtttcagtctcattataatatggaagactttgatttattcacattggatgatgtggac
gccacttttgagaaagttattcagctgaagtataatcagagtgttccattaaaaggcaag
gggtatggattgacaatcacgcccttgcctgctgggcacatgattgggggcacaatttgg
aaaataatgaaggttggtgaagaagacattatttacgctaatgatttcaaccacaaaaaa
gagaggcatttgaacggttgtgagttagaaaagttacaaaggccctctctgttcatcact
gatgcgtttaatgctacgtaccaacaagccaggagaagggctcgggacgaaaaactaatg
accaacattttgcaaactttgaggaacaacggcaacgttctggtcgctgtggacacagca
ggccgtgttttagaactggcccatatgttggaccagctttggagaaacaaggaatcaggc
cttctagtctattctctagctctgctaagcaatgtcagttacaacgttgtagagtttgca
aagtctcaaattgagtggatgagtgataaactgatgaggagttttgaaggcgcgagaaat
aatcctttccagttcaaacatctgcaactgtgtcacagtttacacgaactacagaaggtt
tcaagtcctaaagttgttctcgcgagttcgcctgatatggagagtgggttctctcgcgag
ttgtttcttcagtggtgctcaaatcctaataatagtataattatcacgactaggacgtct
ccggggacattagctcgagatttagtcgataatgggggcaatcgccaaatcgatttggtt
gtgaaaagacgagtcaagttagaaggtagcgaacttgaagagtaccaaaagagccaaaga
gaaaaacgagaggaaaattccagcagggacgaggagtcggattcagacgatgatattgaa
atgagtgtcatatcaaaagggcggcacgatattgtcataaaacaagaaggcaagacctca
ggtggctttttcaaagttacgaaaaaacaatatcccatctacccttttcacgaagaaaaa
atcaaatgtgacgaatacggcgaaataatcaaaccggaagactacaagctagctgatgtc
gtcacagaaactgaagataataaggaaaatgttgtgatcaaaaaagaagaagaggtcatt
cctgaggtggctgagacgccgtccaagtgcatcgtacttagcaggactgtccaggttaac
tgtcaagtgcaatatattgacttcgaaggtcgctcagacggggaatccctcatgaaaatt
ttgtctcagttgaggcccagaagagttataatcgtccgaggttcgcctgagagtactaac
acgataaaaaatcactgtcaggagaatctcgatgcaagagtgtttgctccagtcaggggt
gaagtcgtggatgcgacaactgagactcatatttatcaagtgcgtctgactgatgctctg
gtgtctcaactgaatttccagaaggctaaagatgccgaagttgcgtggcttaacgcccag
attgtggtcagggaaagtcagttggatgcgaggaggatgaatgtcgacaacgaaccaatg
gaagtcgatgaggaagagtcaaaaatattgactctggagccctacggcgacaacatcccc
cacgacacagtattcatcaacgaactaaaactttccgaattcaaacaaatcctggctaaa
agcaacatcaattcagaattttcaggcggagttttgtggtgcagcaacggcactttagcc
atcaggagggtagaaacagggagagtgatcctcgaaggttgcatttcggaagattattac
aaagtgaaagagcttttgtatgagcagtacgcagtactgtag
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