KEGG   Tribolium castaneum (red flour beetle): 659788
Entry
659788            CDS       T01046                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    659788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    659788
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     659788
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     659788
SSDB
Motif
Pfam: ECR1_N EXOSC1 RRP4_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 659788
NCBI-ProteinID: XP_971155
UniProt: D2A4N8
LinkDB
Position
LG6:285726..286615
AA seq 196 aa
MSSPLVCLPGQRLCLSDPSHVSGQGTYERGGYIYATLAGVVDIVPKDNVQIIEVRSSGQE
TLVPSQGDIVTAQIHTITQQFCKCYIKCVGDKVLGRQYRGILRKEDVRATEKDRVEIYKS
FRPGDVILARVLPITEAHTYQLSTAENELGVVTAHSEHGGLMVPVSWTEMQCSKTFVKEA
RKVARVVPESVQNDVK
NT seq 591 nt   +upstreamnt  +downstreamnt
atgtcatcgccccttgtgtgcctcccggggcagcggctgtgcctgtcggacccctcgcac
gtgtccggtcaaggcacgtacgagcgtgggggctacatctacgccacccttgccggtgtt
gtggacattgtccccaaagacaacgtccagatcattgaagtgcgcagttccgggcaggaa
acgctcgtgccgtcacagggcgacatcgtcacagcgcaaattcacacaatcacgcagcag
ttttgcaaatgctacattaagtgtgtcggggataaggttttggggcggcagtatcgcggg
attttgcggaaggaggacgtgcgagcgacggagaaggaccgcgtggagatttacaagagt
ttcaggcccggggacgtgattctggcgagggttttgccgatcacggaagctcacacttat
cagttgtccacggctgagaatgagctgggggtcgtgacggcgcactcggaacatgggggg
cttatggtgcctgtgagctggacggagatgcagtgctccaagacgtttgtgaaggaggcc
aggaaggttgcaagagttgtgccagaaagcgtgcaaaatgatgtgaaataa

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