Tribolium castaneum (red flour beetle): 659853
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Entry
659853 CDS
T01046
Name
(RefSeq) afadin
KO
K05702
afadin
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca04517
IgSF CAM signaling
tca04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
659853
04519 Cadherin signaling
659853
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
AFDN
FHA
PDZ_6
RA_2
Yop-YscD_cpl
PDZ_2
RA_3
Motif
Other DBs
NCBI-GeneID:
659853
NCBI-ProteinID:
XP_008193036
LinkDB
All DBs
Position
LG5:4099785..4150969
Genome browser
AA seq
1744 aa
AA seq
DB search
MHGNANDRRALEREALRNVINQWNANRLDLFELSEPNEDLEFHGVMRFYFQDSGQKVATK
CIRVASDATVEDVIGTLVEKFRPDMRMLSVPSYALYELHEGCPERRMLPDEKPLLVQLNW
HVDDREGRFLLKNIDDKTTNSVGSLDSNASFRRKLSKREKKQLKKQEKLSRMKSENGDIN
DKEDGVAEKLYTELPETSFTRSISNPEAVMRRRRQQKLEKKLQQFRSKDGGPDTGGTLKI
YGEALCKDVPYKTLLLSVRDCAGAVVREMLEKYGLNKTDPSQWCLVQVTQQPGVPDTEYV
LDDDECPLSILMNSPNTGSIMFHVRRRPADCAPRKRKKKPGALGTNTNNPRDVRDAVPLL
VELGPDGSAPHPGDTARTIRLTNDVMEVGSANGIALQLYGPHIQPRHCVITNADGVTSLT
PCHADAHTYVNGQRIHQTTILNHGSLVKFGNSNTYRFLDPVHEDRMRHPAVMDNARIYDS
RSPRALSPTEPSRENIETTFDLEGNVETISTASGAREDNRSLGSASENRLSGMDRYPRGQ
DPILPAVLEFPEDPQEQFLARVITHLDVTTPTFRLAPAYTLYLCARYRASTHYRPELTPT
ERAHKLTVLLQHAAMLIRHTVQDRSTESISQAFWLANASELLHFLKSDRHVSAFSIQAQD
TLADAVQLAFKNLVACLTDELNSAMAHLMSVTGDDHPREVINILSGAMNLLRKCRVNAAL
TIQLFSQLFHWISAKALANVISNSNLCTRSFGNKLFNRLRNLQAWAESQGLELAAECHLA
KIVQCAHLMQAPKYTPEDLANLSSACFKLNSMQLGALLRQYKAEPGEKLAPPPLLEQAAK
AAESVADELARAEGREVTLYEDPAPPLQLLLPDDGFSCDVVQGVPPGLADFLHPLQASGL
CRLAAQPTSSGHWTVYMSAPRPPSALSTTQPEVQVIRLHKAGGGMGLSIVAAKGAGQERL
GIYIKSVVPGGAADRDGRLAAGDQLLSVDGQSLLGITQEKAAEFLVRTGSVVTLEVAKGG
AVYHGLATLLQQPSPTPHRGPRRMSERDLPSRVDSERTIPSSKSVPALHHISPNSEQPRN
PHDVFNPGYSRTSSNNSINTNSAPPANGPVNNQAGLRSRSTHNLHQQDGGFYQNLSVYRN
KIPSPQQLGDRTSALRSSQNSLQSSVVNSQRPASAYYPPPMSVNASRSNLHQSIPNLKSP
PSTHRIHNEESRSGSYPSVNQQHHPQNYPGPNHPYYYDPNRPPQAQPITNYPNNVQHVHS
NGQRQDYNNVGGLLREDMVRQSQNARHEEIMRYLSTNNARINEQNRIEEMRVSKSDDLLK
HHQANDLMKYASSGNIRAHESSKVEIPLYRMKDEEELDKDMRMANNVRSQKLVANAKQQR
VMQYQHPNNQYYAPYHFQMAQNTQSMQNLNLNQYQYYPTSPTYKSPPVAPKPSKRPDEPP
ELPPTSTHPLYSASSQDPPKMAFYPTSTVPSTKTPRDPWAREEQERQAEARREASRQWQE
QQIRELMALPQRTPQQEEQLRVLQLEREFQRRAMEAAEQDDDDTEKESPSPSMSQPVQNP
PPKQEPPPSILKPGAVNTQTQPPPEPVAPPPPERGSSFAVMSMRAKENTKRVSFDTSPPQ
PPPNTLQLEETVREDPNSFIRQAESMLASPTTPTDASPGAAVATPGVIGAQEVYRDPRAR
RLAEQAQQKNQTMPPVPEKLSFKEKMKMFAMETGEQETPKDKSKISRAQREIDNLGSPSS
GLVH
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtaacgccaacgaccgcagggccctcgaaagagaggctctgcgaaatgttatc
aaccaatggaacgccaatcgactggatctgttcgagttatccgaaccgaatgaggacttg
gaattccacggtgttatgcgattttacttccaagactcggggcaaaaagtcgccaccaag
tgcatacgagtggcttcggacgccactgtggaagacgtgatcggaactttggtcgaaaaa
ttccgacccgacatgaggatgttatcagtgccttcctacgctctctacgaactccatgag
ggatgccccgaacgacgaatgcttcccgacgagaaaccgctccttgtgcagctcaactgg
cacgtggacgaccgcgagggacggtttctcctcaaaaatattgacgacaaaacgaccaac
tcggtcggttctctcgactcgaatgcgagttttcggcgaaaattatcgaagcgagaaaag
aagcagttgaagaaacaggaaaaactctcgagaatgaaaagcgaaaatggtgatattaac
gataaggaagacggcgttgcggaaaaattatacacagaattgcccgaaacgtcgttcacg
cgctcgatttcgaacccggaggcggtgatgaggcggcggaggcaacaaaaactggaaaag
aaattgcagcagtttaggtcgaaggatggagggcctgatacgggtggcactttgaaaatc
tatggcgaggccttatgtaaagacgtgccttacaaaaccctcctcctctcagtgcgggat
tgcgctggtgctgtggtccgggaaatgttggaaaaatacggtctcaacaaaaccgaccca
tcgcagtggtgtctcgtccaagtgacccaacaaccaggagtccctgacactgaatacgtc
ctcgacgatgacgaatgccccttatctattctaatgaactcgccaaacaccggctccatc
atgtttcacgttaggagacgaccggcagattgcgctccccgaaaaagaaagaaaaaacca
ggggcgctaggcaccaacaccaataatccgagagatgttcgggatgctgtgccccttttg
gtcgaattggggccagatgggtccgccccgcacccgggggacaccgccaggacgatccga
ctcacaaacgatgtcatggaagtgggatcagcgaacggcatcgccctgcagctctacggc
ccccacatccagccccggcattgcgtcatcaccaacgccgacggggtgacatctttgaca
ccttgtcatgcggacgcccatacctacgttaatggccagcgcatccatcaaaccacaatt
ttaaaccatggaagtcttgttaaatttggcaacagcaacacctatcgatttctagatccg
gttcacgaagacagaatgaggcatccagccgttatggataatgccaggatatacgatagc
cggtcgccgcgagctctcagtcctactgagccctctcgggaaaatatcgaaacgacgttt
gatctggaaggaaatgttgaaacgatttcgacggccagtggagccagagaggataacagg
tcgctcggatcggcatccgaaaataggttgagcggcatggaccgctacccccgcggccag
gaccctatcctccccgccgtgctggagttccccgaggacccccaggagcagttcctagct
cgcgttataacgcatctcgacgtcacaacaccaacatttcgcctcgccccagcttacact
ctatacctctgtgcccgttatcgagcatcgactcactaccgccccgaactaacaccaaca
gaacgtgcccacaaactcaccgttttgcttcaacacgccgccatgctgatccgacacacg
gtccaagaccgaagcaccgaaagcatatctcaagctttctggttagccaacgccagtgaa
ttactacacttcctcaaatcggacagacacgtcagtgcgttctcgatccaagcacaagac
acacttgcagatgcagtacaattagcttttaagaatttagtcgcgtgtttaaccgacgag
ttaaactcggccatggctcatttgatgtcggtgacaggggatgaccatccccgcgaagtt
ataaatattttaagtggtgctatgaatctcctacggaagtgtcgggtcaatgcggcccta
accatccaattattttcccagttgttccactggatttcggccaaagcgctcgcaaatgtg
atcagtaacagtaatttatgtacgagaagtttcggcaataaactcttcaatcgattaagg
aacctgcaagcttgggctgagtcccaaggcttggagttggctgcggagtgccaccttgcc
aagatcgtgcaatgtgcacacttgatgcaagcacctaaatacacgccggaggatttagcc
aacttgtcgtcggcctgtttcaaattaaattcgatgcaattgggggctttattaagacag
tacaaggcggaacctggggagaaattggcaccgcccccgttgctggagcaggcggccaaa
gcggccgaaagcgtcgccgacgagcttgcgcgggctgaaggtcgcgaagtcacactttac
gaagacccagcgccaccactacaacttttactccccgatgatgggtttagctgcgatgtc
gttcaaggggttccaccaggtcttgccgacttcctgcacccgctgcaagcgtcgggtttg
tgtcgtctggccgcgcaaccgacgagttcgggccattggacagtgtacatgtccgcgcca
cggcctcccagtgctttgagtacgacccaaccagaggtccaagtcattcggttgcataag
gctgggggtggcatgggcttgtcgatagtggcagccaaaggagccggtcaggagcgactc
ggaatttatataaaatcggtggttcccggaggagctgcagatcgagatgggcgattggct
gctggcgatcaactactatcagtcgatggacaatcccttctgggaatcacacaagaaaaa
gccgccgagtttctggtacggaccggaagtgttgtcacacttgaagtagcgaaagggggt
gctgtgtatcacggattggccacattgcttcaacagccgagtcctacacctcatcgaggt
cctcgacgcatgtctgagcgggatttgccatcgagggtggactcagaacgcacaattccc
tcttcaaagtccgtgccagcgcttcatcacatctcaccaaactcggagcaacctcggaac
ccacacgacgtctttaacccgggttatagtcggacctcgtcgaataatagcatcaatact
aatagtgcaccacctgccaacggtcctgttaacaatcaggcgggtttgcgcagcaggtct
acgcacaatctgcaccagcaggatgggggattttaccagaatctcagcgtttataggaac
aaaattcccagcccgcaacaattgggagacaggacttccgcccttcgaagttctcaaaac
tctctccaatcttcagtagtgaattcccaacgcccggcttcggcctactaccctcccccg
atgtctgtgaacgcctcacgttccaatctccaccaatcaatcccgaatttgaaaagtccc
ccatccacccatcgaatccataacgaggagtccaggtccggctcctacccaagcgtcaac
caacaacaccatccccagaactacccgggtccaaaccacccctattactacgacccgaat
cgtccacctcaagcacaacccatcacaaactaccctaataacgtgcaacacgtccactcg
aacggacagcgacaagattataacaacgtcggtggtttactgcgtgaagacatggtaaga
cagtcgcaaaatgcccgccacgaggagataatgcggtacttgagcacaaataatgctcga
attaacgaacaaaaccgaattgaagaaatgagagtttcgaaaagtgacgatctgttgaag
catcaccaagccaacgatttgatgaaatatgctagcagtggaaacatcagagcacacgag
agtagcaaagtcgagattcctctctaccggatgaaagatgaagaagagttagataaagat
atgcgaatggccaacaatgtgaggtcgcaaaaattagtcgccaatgcgaaacaacaacgc
gtaatgcaataccaacatcccaacaaccaatactacgccccctaccacttccaaatggct
caaaacacacaaagtatgcaaaatctcaacttgaaccagtaccaatattatccgacatcc
ccgacatacaaatcgcctccggtggcccccaagccgtcgaaacgacctgacgagccacca
gaattgccgccaacaagcacccaccctttgtactctgccagcagtcaagatccaccgaag
atggcattttatccgacttcgacggtaccgtcgacgaagacaccgcgtgatccttgggct
agagaggaacaggaacgtcaagctgaagcaaggagggaggcttcgagacagtggcaggaa
cagcaaattcgggagttgatggcgttgccacagaggacgccacagcaggaggaacagttg
agggtgttgcagttggagagggagtttcagaggagggcgatggaggctgctgagcaagat
gacgatgatactgagaaggaaagtccaagtccgagtatgtcccagcctgtccagaaccct
ccacctaagcaggaaccgcccccttccatcctgaaaccgggggctgtaaacacccaaaca
cagccgcctccagagccagttgcgccgcccccgcctgaacgaggctctagtttcgccgta
atgtccatgcgggcgaaggaaaacacgaaacgcgtgtccttcgacacgtcccctccgcaa
ccccctcccaacaccttgcaactggaggaaaccgtcagagaggaccccaatagttttatt
cgccaagctgaatcgatgttggcgtctccgaccacccccacggacgcctcccccggcgcc
gccgtggccaccccgggggtgatcggggcccaggaggtgtacagggaccccagggcgcgc
cgattggccgaacaagcgcagcagaaaaatcaaacaatgcctccggttcctgagaaattg
tcatttaaagagaaaatgaaaatgtttgcgatggagaccggcgagcaggaaactccgaag
gataagagtaagataagtagggcacaaagagaaattgataatttgggatcaccaagttcg
ggacttgttcattaa
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integrated database retrieval system