Tribolium castaneum (red flour beetle): 660174
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Entry
660174 CDS
T01046
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
660174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tca03400
]
660174
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
660174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
RRM_PARP14_1
AAA_29
Motif
Other DBs
NCBI-GeneID:
660174
NCBI-ProteinID:
XP_971522
UniProt:
D6W723
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All DBs
Position
LGX:complement(3245642..3250323)
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AA seq
1079 aa
AA seq
DB search
MSKRFSTGQSNTLLNYFQSPKSSNGKDVKQNGAGKRDLVSNKDEGDVSPVQAKKRKKTTI
IDSDSDDEHLPIQPTSKKSKNGKKRPVSDSDSESSDSDSKPAEKSLKLSASKTNEKSAAK
AAPIVSDLNTNWLHNRLDFLQPDKIRDVNKRRPDDPDYDPRTLYIPQSFLEKQTPAMRQW
WVLKSTHMDSVLFFKVGKFYELYHMDAVVGVTQLGFSYMKGEFAHSGFPESAYHKMANAL
IEKGFKVARTEQTETPEMMAERCKKQGRATKFDKVVNREICQISTKATCVYTAQLPDAMH
SQSCYMYAIAEKDVTGSQRRFGICFIDTSIGVFKLAEFDDDKHCSKLLVCLSEYPPGLIL
TERKKLSSKLKLILNTNYRDVRRESLAPESQFYGASTTIEKLLNGNYFRNESNDLCLPEV
LKNVTDGYNAKPEFELMVKALGGCLWYLHDSKLDIQVVSLGKFEIYQPLEMNVREKSPRS
CMILDSVTIVNLNLLGEENSLQKTLDYCQTAFGKRLLTQWICRPLCVVEKIKERQEAVQE
LVKNTSLLKDAQDVLKKLPDLERQLAKIHTYGNKFFAQDHPDSRAVFYEAATYSKRRIGD
LLKTLQGFELAQNLCPLFKGCQSSLLKRLTQFKPDGHYVDLTELLLFFKHAFDQEEAQKE
GKIIPKPGVDENYDQAQDAIKAVTKKLDEYLVELQQFFGCKVTYFGSDKKRFQIDIPESH
TKKVTSEYQLEGTKKGAKPSKRYSTSRSRQLLAEMMKAESERAKVIQDLNRRIFQKFSEK
REQWEQAIDCITVLDVLCSLAQYACNFGQDICIPEIEPMGNSDKIVIENGRHPCITNIDN
FVPNDTKMGVADFANILLITGPNMGGKSTLMRQIAIICIMAHMGGYVPASGCTLSLIDRI
FTRLGAHDDIVQGQSTFLVELSEAAVMLHHATPHSLVLLDELGRGTSTHDGNAIATAYVE
KLTTINCRTLFSTHYHSLVDHFEARRDVQLGHMACMVENDDDPTEESVTFLYKMARGRCP
KSYGFNVARLSGLKHCIVSRGREISKQLENESKSRQVFRDLFTSSVATIRSAMSKLSLS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacggttcagcacgggccaaagtaacacccttctgaattatttccaatctccg
aaaagctcaaatggtaaagacgtcaagcaaaacggcgccgggaaaagggatcttgtttct
aataaggacgagggagacgtatccccagttcaagccaagaaacgcaagaaaacgacaatt
atcgacagtgactcagacgatgagcatttgccgatccagccaacttccaagaagtcgaaa
aacgggaagaaacggccggtgagcgactcagacagcgagtcttcggacagcgacagcaag
cccgccgagaagtcgctcaaactgtccgcttccaagacaaatgagaaaagcgcagccaaa
gcggccccaattgtcagcgatcttaacaccaattggttgcacaatcggcttgacttcctc
caacccgataaaatccgcgatgttaataagagacggcccgatgatccagactatgaccct
cgcacactttacattcctcagagcttcctggagaagcaaactccggcaatgcgtcagtgg
tgggtcctgaaaagcacccacatggactcggttttgttcttcaaagttggaaagttctac
gagctttaccacatggatgccgttgtgggggtcacacaactggggttttcctacatgaag
ggggagttcgcccactccggctttcccgaaagcgcctaccataagatggcaaatgcttta
atcgagaaggggtttaaggtggcaaggaccgaacaaaccgaaacccccgaaatgatggcc
gaaaggtgcaaaaaacagggacgtgccaccaaattcgataaagtagtcaatcgggaaatt
tgtcaaatttcaacgaaagccacttgcgtctacaccgcacagttgcccgatgccatgcat
tcgcagtcttgttacatgtatgccattgcagagaaggacgtaactggttcgcaaagaaga
ttcggaatttgttttattgatacgtccattggcgtcttcaaactggcagagtttgatgac
gacaaacactgttcaaagcttttagtctgtctttcggaatatccaccaggattaatcttg
actgagagaaagaagctgagctccaaactaaaactaattttaaacaccaactacagagat
gttcggcgagaatcgctggctcccgagagtcaattttacggtgccagcaccactattgaa
aaattactgaacgggaattattttcgtaacgaaagtaatgacctgtgtttgcctgaagtc
ctcaaaaacgtcacagacggatataacgctaagccagagtttgagttaatggtgaaagcg
ttaggtggctgcttgtggtacttgcatgactctaagctcgacattcaggtcgtttcgttg
gggaaattcgagatttaccagccgttggagatgaatgtgcgggagaaaagcccccgcagt
tgcatgattttggattctgtgacaattgtcaacttgaatctcttgggtgaagagaacagt
ttgcaaaaaacgttggattattgtcagactgcgtttggcaaaaggttgctgacacagtgg
atctgtcggcctttgtgtgtcgttgagaaaattaaagaacggcaagaggcggttcaagag
ctggtcaaaaacacgtctttgttgaaagacgcacaagacgttcttaaaaaattgccagat
ttggagcgacaattggccaagattcacacttacggtaacaaattttttgcccaagatcac
cccgacagtcgcgctgttttctacgaagcggccacttattctaaaaggcgaattggcgac
ctcttgaaaactttgcaagggtttgaactggcacagaacttgtgcccgttgttcaaaggc
tgccagtcgtcgttacttaagcgcttgactcaatttaaacccgacggtcattacgttgat
ttgaccgaactgttgttgttttttaaacacgcgtttgaccaagaagaggcccagaaagaa
ggtaaaataatcccaaagccgggcgttgacgagaattacgaccaggcacaagatgctatc
aaggcagtaacgaaaaaactcgatgagtatttagtcgaactgcaacaatttttcggctgc
aaagttacatacttcggttcggataaaaaacgcttccaaattgatattcccgaaagtcac
accaagaaagtaacaagtgaataccaactcgaagggactaaaaaaggcgctaagccctca
aaacgttactcaacgtccagaagtcggcaacttctagcagagatgatgaaagcggagagc
gagagggcgaaagttatccaagatttgaaccggaggattttccagaagtttagcgaaaag
cgcgagcagtgggagcaagccattgattgtattactgtcttggacgtgttgtgttctcta
gcgcaatatgcttgcaatttcggacaggatatatgtattcctgaaattgaaccaatggga
aactcagataaaattgtcattgaaaatggtcgtcacccctgcattacaaacattgataac
ttcgttcccaacgacactaaaatgggagttgccgattttgcgaacattttgctcatcact
ggacccaatatgggtggtaaatccactctgatgcgtcagattgccattatttgtattatg
gcacatatggggggttacgtgcctgcgtccggctgtactttatctctgattgatcgaatt
tttactcgtctgggggctcatgacgatattgttcaaggccagtctacgttcttggtagaa
ctgtccgaagctgcagttatgttgcatcatgcgacgccacattcgctggtcctgcttgat
gagttaggtagaggtacttccacgcacgatggaaatgctatagctaccgcgtatgtggaa
aaactaacaacgattaattgtcggacgttgttttctacgcactaccacagtcttgtggac
cattttgaggcgaggcgagacgtgcagttgggacatatggcttgcatggtcgaaaacgac
gacgatccgactgaagagtcggttactttcctgtataagatggcaagagggcgctgtccg
aagtcgtatggtttcaacgtagcgcgactctcgggcttgaaacattgcattgtttcacga
gggcgggaaatatccaaacagttggagaatgaatccaaaagtcgtcaagttttcagggat
ttattcacatctagtgtggcaacgattagatctgctatgtcaaagttatctctctcttaa
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