KEGG   Tribolium castaneum (red flour beetle): 660256
Entry
660256            CDS       T01046                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03013  Nucleocytoplasmic transport
tca03015  mRNA surveillance pathway
tca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    660256
  09122 Translation
   03013 Nucleocytoplasmic transport
    660256
   03015 mRNA surveillance pathway
    660256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    660256
   03041 Spliceosome [BR:tca03041]
    660256
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     660256
    TREX complex
     660256
Spliceosome [BR:tca03041]
 Complex C
  Other components
   EJC/TREX
    660256
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    660256
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz
Other DBs
NCBI-GeneID: 660256
NCBI-ProteinID: XP_971598
UniProt: D6X2T6
LinkDB
Position
LG9:complement(9545859..9547094)
AA seq 234 aa
MVDTIEMSLDEIIKSKPRRGGRRGGRGGTRGGGAPRRGTFRRAGGVQRGRGRGGITRQYT
RGDVNSAWKHDLFEGYGPRKVAAARAVVQSNVGPTKLMVGNLDFAVSDSDIQELFAEFGP
LKSASVHYDRSGRSLGTADVIFERRTDAIKAMKQYNGVPLDGRAMNIQIITSEIPSPVRR
PTGERKFQSRRGAAPAKGRPNRGRGGGRSFRNQKKQPTAEELDAELDAYTKEMK
NT seq 705 nt   +upstreamnt  +downstreamnt
atggtcgacacaattgaaatgagtttagatgagataataaaatccaagccccggcgcggc
ggccgtcgcggaggtcgcggcggaacccgcgggggtggcgcgccaagacgcggcacgttc
cgaagagccggcggcgtccaaaggggccgaggacgcggaggaataacgcgccagtacacc
cggggagatgtgaacagtgcttggaagcacgatctgttcgagggctacggcccgcgtaaa
gtggccgcggctcgggccgttgtgcagtccaatgtgggccccactaagctcatggtgggc
aatttagactttgcggtctccgactcggatattcaggaattgttcgccgagtttgggccg
ctaaagagcgcctcggtgcactatgaccgctcggggcggtcgctcggcaccgctgatgtg
attttcgaaaggcgcaccgacgctattaaggccatgaagcagtacaacggagtgcctctc
gacggacgcgccatgaacattcaaatcatcacgtcggagattccgtcgccggtcaggagg
cccacgggagagaggaagttccaaagcagaagaggggctgcacctgccaagggacgacct
aacagaggtcgtggaggaggacgaagtttcagaaatcaaaagaaacaaccgacagctgaa
gaactcgacgctgaattagacgcctacaccaaggagatgaaataa

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