| Entry |
|
| Name |
(RefSeq) putative RNA exonuclease NEF-sp
|
| KO |
| K14570 | RNA exonuclease [EC:3.1.-.-] |
|
| Organism |
tca Tribolium castaneum (red flour beetle)
|
| Pathway |
| tca03008 | Ribosome biogenesis in eukaryotes |
|
| Brite |
KEGG Orthology (KO) [BR:tca00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
660590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:tca03009]
660590
Ribosome biogenesis [BR:tca03009]
Eukaryotic type
Pre-60S particles
RNases
660590
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
LG3:3927835..3930638
|
| AA seq |
631 aa
MKSKSTKRIENKKKKMAALIEISRLNEYDRNLKKTQISEANGSNSSELEPSVKKPRTEAP
IGDTVEQKTLLPELGPSGKPKLSGLELQELKKMLREKTTKMRQQPVFKLRDMGTNASLST
DLENRVPLFLSDLQHLIMYSQLGHHAPYSPARWCALEKFNKLSTTCLLVVENMTVNHYTT
HENIFPFVSSTFEHKLEILAPNSSNSDVVRELSMVPLTATQVKKFSTKFGTLEDAVHRTT
EVFDSVRSLFPIEKDKESKNGLSMDLPFTDRFPRTQLLLSGWQMVEENFPLPIKGLMETK
YAGYVLTKDRYEDVTPFSKMFGIDCEMCKTTIGDLELTRVSVVDEHLNTFYDTLVKPDNR
ITDYLTRFSGITYKMMRNITTRLKDVQDDLRRLLPADAILVGQSLGNDLHALKMMHPYVI
DTSVIFNITGDRSRKTKLKTLTEEFLSEKIQEGQGGHCSTEDSLASLKLAQLKLRKSLYF
GDAVMGNVHNEIRTCPELGTYNYATSMLKQTTKLDKTALVVCPEEITSKYKYCVDKGAEV
RQQNEKIKFFSEKSCKEVVRKMCDSLGMFSLNIGHVKLQEGQLEGTKVFKNVDKWVKEIY
EKMPTPGLVIVLFPGVEGSNGCCFIQLKRDV |
| NT seq |
1896 nt +upstreamnt +downstreamnt
atgaaaagcaaatcgacaaaacggatcgaaaacaagaagaagaaaatggcagcgttgatt
gaaatctcccgactgaatgaatacgatagaaacttgaagaaaacgcaaatcagtgaagca
aatggctccaacagttccgagcttgagccaagtgtcaaaaagccaagaaccgaagcaccc
attggagacaccgttgagcaaaaaacattattgcctgaattaggcccctcagggaagcca
aaactaagtgggttagagctccaagaactgaaaaaaatgttgcgagagaagacaacaaaa
atgcgtcagcagcccgtgttcaagttacgtgacatgggcacaaatgccagtctatccaca
gatcttgaaaaccgcgtccctttattcctctcagacttgcaacacttgattatgtactca
caacttggacaccatgcaccttattctcccgctagatggtgtgctttggaaaagttcaac
aaattatcgaccacttgcctcctagtggtggaaaacatgactgtaaaccactacaccacg
catgaaaatatcttcccgtttgtgagttcaacctttgaacataaactcgagattctggcg
ccaaactccagtaacagtgatgttgtgcgggagttgtcaatggtgcctttgactgccaca
caagtgaagaagttttctactaaattcgggactttggaagatgcggtgcacagaactacg
gaggtttttgattcagttcgaagtcttttccctattgagaaggataaagagtcgaaaaat
ggtttatcgatggatttgccgtttactgatcggtttccgaggactcagttgttgctatct
gggtggcaaatggttgaagagaattttccgttgcccatcaagggtctgatggagactaaa
tacgcgggttatgtgttgactaaagacagatatgaggacgtgactcctttcagtaaaatg
tttgggattgattgcgaaatgtgtaaaaccacaattggggatcttgaactgactcgagtt
tcggttgttgatgagcatttgaacacgttttatgacactttagtcaagccagataacaga
attactgattatttgacccgattttcggggattacgtataaaatgatgagaaatattaca
acaagattgaaagatgtgcaagatgatctgaggagattactgcctgctgatgctattctc
gttggacagtccttaggaaacgatctgcatgccctgaagatgatgcatccttatgttatt
gatactagtgttattttcaatataaccggtgaccgctctcgcaaaaccaagctcaaaacc
ttgactgaggaatttctttctgagaagattcaggaggggcaaggagggcattgctcaact
gaggacagtttggcatccttaaagttggcacagctcaaattgaggaaaagtttgtacttt
ggagatgcagtcatggggaatgtgcacaatgaaattaggacttgtccagagttggggacc
tacaattatgccactagtatgttgaagcaaacgactaaattggataagacggccctggtt
gtgtgtcctgaggaaatcacttcgaaatataaatattgtgtagataaaggagccgaggtg
cgacaacaaaatgagaaaattaagtttttttctgaaaaaagttgtaaagaagttgttagg
aaaatgtgtgattctttgggtatgttttcgttaaatattggacatgtgaaactccaagag
ggacagttggaaggaacaaaggtctttaaaaatgttgataagtgggtgaaagaaatttac
gagaagatgccgacacctggacttgtgattgtgttgttccctggggttgaaggaagtaac
ggttgttgcttcatacaacttaagagagatgtataa |