Tribolium castaneum (red flour beetle): 660632
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Entry
660632 CDS
T01046
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03015
mRNA surveillance pathway
tca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
660632
09123 Folding, sorting and degradation
03018 RNA degradation
660632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
660632
03041 Spliceosome [BR:
tca03041
]
660632
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
660632
mRNA cycle factors
Stress granule specific factors
660632
Spliceosome [BR:
tca03041
]
Complex C
Other components
Complex C specific factors
660632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_7
RBD_DEAH11
RRM_occluded
RRM_RdRP1_2
DUF761
Motif
Other DBs
NCBI-GeneID:
660632
NCBI-ProteinID:
XP_971941
UniProt:
D6X547
LinkDB
All DBs
Position
LG10:7098652..7100425
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AA seq
565 aa
AA seq
DB search
MTSRQGILFPLTSLYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNF
SQTIEAERVLDTMNFDLLKGKPIRIMWSQRDPSLRKSGIGNVFIKNLDKSIDNKAMYDTF
SAFGNILSCKVAIDDDGVSKGYGFVHFESIEAANKAIEKVNGMLLNGKKVYVGKFIPRAE
REKEIGEKSKKYTNVYVKNFGRNLTQEQLYDLFKNYGTITSCVVMANPDGTSKGFGFIAF
EEPESAEKAVTEMNNYELNGTNLYVGRAQKKSERIKELKKCYEQMKLERYNRIQGANVYI
KNLDDTFDNDRLRKEFSQFGAITSAKVMTEGGRSKGFGFVCFSTPEEASKAITEMDGRMI
GSKPIYVALAQRYEDRRAYLSAQCMQRIRHQTMSPPLTTPQFLIPTLPRFYNHMAQIRPT
PRWTAQVPRLNGTYNMPLLPATPYRSTSRPQVQINRSARPITGQQVPIARPNSKYTASAP
PRGVSVGVGNGGDPGADDKRMLGERMYRVIEKTYPEIAGKITGMLLEIDISELKALVNNE
GSLKAKVEEAVAVLQAHNKGLTVQD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgtcaaggaatcctcttcccgctaacgtctctgtacgttggtgacttgcat
ccggacgtcaccgaagccctactttacgagaaattttccccggctggtcagatcctgtct
ttgagggtttgccgcgactcaagaaccaaacaaagtctgggctatgcctacgtgaacttc
agtcaaaccatagaagctgaacgggtcctggacaccatgaactttgacctcctgaagggg
aaacccatcaggataatgtggagtcaaagggacccctcgttacgcaagtcgggcattggt
aacgtatttatcaagaatctggacaaaagcatcgacaataaggcaatgtacgacactttt
tcggcctttggaaacatactttcgtgtaaggttgccattgacgacgatggtgtttcaaaa
ggctatggtttcgtccatttcgagagtatcgaagctgcgaataaagcaatcgaaaaagtc
aacggtatgctcttgaacggcaaaaaagtctacgtcgggaaatttataccgcgcgccgaa
cgcgagaaagaaatcggcgaaaaatccaagaaatacaccaacgtttacgtgaaaaatttc
ggccgcaatttaacacaggagcagctgtacgacttgtttaaaaactacggcaccatcaca
tcatgcgtggtcatggccaacccagacgggacgtcgaaaggtttcggcttcatcgccttc
gaagagccggaaagtgccgaaaaagccgtcaccgaaatgaacaattacgaactaaacggc
acaaacttgtacgtcggacgcgcccaaaaaaaatccgaacgaatcaaagaactgaaaaaa
tgttacgaacaaatgaaactcgaacggtacaatcgcatacagggcgcaaatgtttacatt
aaaaaccttgacgatactttcgataatgaccgcttacgcaaggaattctcccagtttggg
gccatcacatcagcgaaggtcatgactgagggtgggcggagcaaaggtttcggtttcgtt
tgtttctccaccccggaggaggcgtccaaggcgataacggaaatggacgggcgtatgatt
ggctcaaagccgatttacgtggcgcttgcgcagcgttacgaggatcgaagggcgtattta
agtgcgcagtgtatgcaaaggatccggcatcagacgatgtcgccgcctttgaccacgcct
cagtttcttattcccacccttccgcggttttacaaccatatggcacagatcaggccgacg
ccgcgttggactgcacaagtgccacgtttgaatgggacctataatatgcccctcctaccg
gcaacgccctataggtcgacgtcgcgtccccaagttcagattaatcgaagcgcgaggcca
attacggggcaacaagtgccaattgcgaggccgaatagtaagtatacggccagtgcgccc
ccacggggggtcagtgtgggggtggggaatgggggcgatccgggggcggatgataagagg
atgttgggcgagaggatgtatcgggtgattgagaagacgtatcccgagattgcggggaaa
attactgggatgttgttggagattgatataagtgagctgaaggctttggttaataatgaa
ggttcgctgaaggcgaaagtggaggaggcggtcgctgtgttgcaagcgcataataagggg
ttgacggtgcaggattaa
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