Tribolium castaneum (red flour beetle): 661297
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Entry
661297 CDS
T01046
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
661297
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
DUF6853
Motif
Other DBs
NCBI-GeneID:
661297
NCBI-ProteinID:
XP_015833560
UniProt:
A0A139WPL4
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Position
LGX:complement(4619144..4627519)
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AA seq
1817 aa
AA seq
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MFRPNSAIWTLLAFILFQVVQSNSQVFGQSYSRIRGNPSGASVKRGDQPPDIDSEYPDGD
VLHPLTDVFNRRPYTHNHGYVPVKLHPCEQSSCYPATGNLLIGREHQLYASSTCGLHGPQ
RYCIVSHLEERKKCFRCDSRPTNKPNPLFNHNISNIVYRMYPGTRQKSWWQSENGKEGVY
IQLDLEAEFHFTHLIITFKTFRPAAMLIERSYDFKQTWHVYRYFAYNCAESFPHIREGYP
VNLTDVVCESRYSSIDPSTDGEVIYRVLPPTLHIDNPYSEQVQNLLKMTNLRINFTKLHT
LGDDLLDKREDIQEKYYYAITDMVVRGSCSCYGHANRCLPLPGIEPKPDMVHGRCECTHN
TKGRNCEKCEDFFNDLPWRPAIGKQTNACKKCNCNNHATSCHFDAALYEATGRISGGVCD
GCQHNTMGPNCEQCKPFYYRDPQRDIQDPEVCRPCDCDPRGSLDNGICDSITDAENNLIA
GSCHCKTNVEGRRCDICKNGFWNFTESNPDGCQSCTCNTFGTIDNQGCNVYNGECTCKRY
VTGRDCNQCLPEYWGLSEKRDGCQPCDCDPGGSFDNNCDVITGQCLCREHMTGRTCSIPK
QQHYTASLDFLLYEAESARASPNCQVVIREPPRDGSDVTWTGIGFMKAFEPSYIEFTVDN
IKTGMDYEIVIRYEPTMPTNWEEVEVTLERPGPVDPNGPCNGARDDPRRVALPSNSRSVT
VYPPVCLEPGRTYKIRLTFRRSNFERETPSASVLIDSVVLIPRIEKIPWFYGSVPAEARR
QEFERNRCSSYSSYLIHTGQIPEVCKKYYSSIGAYIFNGAFSCQCDPTGSLSKLCDEYGG
HCTCKLNVVGRRCDQCAPGTYGFGPEGCKSCDCNSIGALDNFCNATTGQCKCRANTYGRE
CDQCRTGFWNFPNCQRCDCNGHADICDSKTGACINCKDNTEGHNCEQCVDGFYGDPRLNV
DIPCRPCPCPGSPWSNHSYADRCSLEASTKDVICECHVGYSGSRCDVCSDNYFGNPEEPG
GLCQPCDCNDKIDILKPGNCDPHTGKCKQCLYDTTGDHCEVCRPGFFRYSDDMMCEECVC
HPLGTNSSAGPCDPSSGQCVCLPNVTGLNCDQCIANHWKIASGEGCEPCNCDPQGSLRPQ
CNLFDGQCECRPGFGGRQCNECVARFWGDPKVECRECKCDARGSRSLQCDMRTGACKCLP
GIGGYNCDRCDRGYLGQAPECIPCGECFDNWDRILQETRNQTMDLINRAGDIKKVGATGA
YTKEFDDMQFQLDEIKQLLSNTHEVDIDAIDKELQDLRTKINETELGSVKELDDSIATTK
ENMLLTDLKLKSLKQRIDDFKNKTKELEMNGTQLQEANVQGALTLIQNAKVKADLAAHKA
ERTEETINYAERQIKATESTINETAHNFNQQLKNNEKKLIDLNEKLDSLKQTLPDLNEQI
CDGRGDPCDSLCGGAGCATCGVSISCENGAKQQAETALAIANRTEMALREKEAMANDFIR
NVSQINTNETRNIAQETYDKAKGGLMKANDSLNNVLNLVKEVNEFMDRNDTKEDIKNFTQ
QILAMKIELEPDEITNMANKIKEAVQHLTDIDPIIEATKDDLRRVNRLRENAEYAKTNAS
KILTDAADVTSTLENTTIAQDNAQSAIDTAWNDINIVNDRLKQIGSKTQSAQKKTNNTAD
DLKKLEEQLNQLQRNITDNGIYANRVVNESSNILEKARTTYDDFNELQAQYSKVQRNLTT
SLDKVQSSKDRANDLFKRAWELVAKVTSTEEEISKLENSSQQATLTNLENILQDLIRRMN
GYNQKIQERVHYYKQCN
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcccaaattcggcaatatggacacttttagcctttattttattccaagtagta
caaagtaattcacaagtattcggtcaatcgtactcgcggataagaggaaacccctcagga
gcttcagtaaaaaggggtgaccaaccgcctgatatagatagcgagtaccccgacggcgac
gttcttcatcccttgacggatgtcttcaatcgccgaccttacactcataatcatgggtac
gtgccggtcaagctacatccttgtgagcaaagctcgtgctatccagccactggaaaccta
ctaataggtcgggaacatcagttgtacgcgtcttccacttgcggcctccacggcccacag
agatactgtattgtgtcgcatttggaagagcggaagaagtgttttagatgcgattccagg
ccgaccaacaaaccaaatcctttgtttaatcacaacattagtaatattgtctataggatg
tatcctgggacgcggcagaagtcgtggtggcagtccgaaaacggcaaagagggtgtctac
atccagttggatctagaagccgagtttcactttacgcatcttattatcacgtttaagact
tttaggcctgcggctatgttaatcgagcgttcgtacgatttcaaacagacgtggcatgtc
tatcgctactttgcctacaactgcgctgaaagttttccgcatattagggaaggatatcct
gtgaatctcactgatgttgtttgcgaatcgcgctattcgtcgatagacccgtcaacggac
ggtgaagtgatttaccgcgtgttgcccccaactctccacattgacaacccgtactcggaa
caagtccagaacttgctcaaaatgaccaatttgcggatcaatttcaccaaattacacact
ctgggtgacgacctcctcgacaaacgcgaggacatccaagagaagtactactacgccatc
accgacatggtggtgcgcggctcctgttcgtgctacggacacgctaataggtgtctacca
ctgccggggattgagcccaagccggacatggtgcacggccgctgcgagtgcacgcacaac
accaaaggccgcaattgcgaaaagtgtgaggactttttcaacgacttgccgtggcggcct
gccatcggcaaacaaaccaacgcgtgtaaaaaatgcaactgtaacaaccatgcaactagc
tgccatttcgacgccgctctctacgaagccaccggtcgcatcagtggtggcgtttgcgac
gggtgccagcacaacaccatgggccccaactgcgagcagtgcaaacctttctattacagg
gacccgcagcgggacatccaggaccctgaagtgtgtcggccctgtgattgcgaccctcgc
ggatcgcttgataacggcatttgcgactctatcaccgatgctgagaataatctaattgct
ggaagttgccactgtaagactaatgtggaaggccgccggtgcgatatttgcaagaacggc
ttttggaactttacggaaagtaatccagatgggtgtcagagttgcacttgcaacactttt
ggaacaattgacaatcagggttgtaatgtgtacaatggggagtgcacttgtaagaggtat
gtgactgggcgcgattgcaaccaatgtctccccgagtattgggggctttcggaaaaacgc
gacggttgccagccgtgcgattgtgatcctggaggttcgttcgataacaattgcgacgtt
atcactggacagtgtctctgccgagaacatatgacggggcggacgtgtagcatccccaaa
cagcaacactacaccgcaagtttggacttcctattgtacgaagctgagtcggcgagggcg
tcacctaactgtcaagtcgtaataagggagcccccgcgggacgggtccgatgttacatgg
accgggatcgggtttatgaaggcttttgagccgtcgtacattgaattcaccgtggataac
atcaagacgggcatggactacgaaatcgtgatccgctacgaacccacaatgcccacaaac
tgggaggaggtcgaagtgaccctcgagcggccaggccccgttgatccaaacggcccttgc
aacggagcccgcgatgatcccagaagagtcgcactaccgtcgaacagcagaagcgtcact
gtgtacccccctgtgtgtctggagcccggccgaacctacaaaatccggctgactttccgc
cggtctaacttcgaacgcgagacaccctcagcttcggtcttaatagactcggtcgtgtta
atcccccgcattgagaaaatcccctggttctacggctcggtgcccgccgaggcccggcgc
caagaattcgaacgcaaccggtgcagctcctactcctcctacctaatccacaccggacaa
atccccgaagtttgcaaaaagtactacagcagcattggcgcttacatcttcaacggcgcc
ttctcctgtcaatgcgacccgaccggctctctcagcaagctttgcgacgagtatgggggc
cactgcacctgcaaactgaacgtggtcggccgccggtgcgaccagtgcgcccccgggact
tacggcttcgggccggagggttgcaagtcttgcgattgcaacagtatcggggcccttgac
aatttctgcaatgccaccactggacagtgcaaatgccgggccaacacgtacgggcgggag
tgcgaccagtgcaggaccggcttttggaatttccccaactgtcagaggtgcgactgtaac
gggcatgcggatatttgtgattccaaaaccggggcttgtatcaattgtaaggacaacacg
gaggggcacaattgcgagcaatgcgtcgacgggttttacggggatcccagacttaacgtg
gatattccgtgccggccgtgtccctgcccggggagcccctggtcgaatcactcctacgct
gataggtgtagcctggaagcgagcaccaaggatgtgatttgtgagtgtcatgtggggtat
tcagggtcacgttgtgacgtctgttctgataactatttcggaaatccggaagaaccgggc
ggtttgtgccaaccgtgcgattgcaacgataaaattgatatccttaaaccgggaaattgt
gacccacacaccggtaaatgcaagcaatgtttgtatgatacgacgggagaccactgcgag
gtgtgtagacccggctttttccgatattccgatgacatgatgtgtgaagagtgtgtctgt
cacccattgggcacgaacagctcagccgggccttgtgacccatcttccgggcaatgcgtc
tgtcttccaaacgtgaccggattaaattgtgaccaatgtatcgccaaccattggaaaatt
gcaagtggggagggttgtgaaccttgcaattgtgacccgcaaggctcactacgaccacag
tgcaacttgttcgatgggcaatgcgaatgtcggccaggttttggtggcagacagtgtaac
gaatgtgtggccagattctggggagaccccaaagttgaatgtcgcgaatgtaaatgtgac
gcaagagggtctaggtctttgcagtgtgacatgagaactggtgcttgtaagtgtttgcca
gggataggtgggtataactgcgacaggtgtgatcgaggctacttgggacaagcacctgag
tgtatcccttgtggggaatgtttcgataattgggaccgcattttgcaagaaacgcgaaac
caaacaatggatttaattaaccgtgccggtgatatcaagaaagttggcgcaactggcgct
tacaccaaagaattcgacgatatgcaattccaacttgacgaaataaaacaactgttgagt
aacacccacgaagtcgatattgacgccattgataaggaattgcaagacttacgtacaaaa
atcaacgagactgagcttggaagcgtcaaagaacttgatgattcaatcgccacaaccaaa
gaaaatatgctactaaccgacttaaaactgaaaagtttgaaacaacgaatcgacgacttt
aaaaacaaaacaaaagaactggaaatgaacggtacgcaactacaagaagccaacgtccaa
ggggcccttaccctaatccaaaatgccaaagtcaaagctgatctcgcagcgcataaagcg
gaaagaaccgaagaaactataaattatgccgaacgtcagattaaagccactgaaagcacg
attaacgaaactgcacataacttcaaccaacagctgaagaacaacgaaaagaagctcatc
gacttgaacgaaaaacttgacagtcttaaacaaacccttcccgatttgaatgagcaaatt
tgtgacggcagaggcgacccttgtgactcgttgtgtggcggcgcaggttgtgccacttgt
ggtgtgtcaatttcgtgtgaaaatggggccaaacaacaggctgaaaccgcgctagctata
gcgaatcggacggaaatggccctccgtgagaaggaagcaatggctaatgatttcatccga
aatgtctctcaaataaacacaaatgagacgaggaatatcgcacaagagacgtacgataaa
gccaagggagggttaatgaaagctaatgactcgttgaataatgttttgaacttagtgaag
gaagttaacgagtttatggaccgcaatgacaccaaggaagatataaaaaatttcacgcag
cagattttggccatgaaaattgaactcgaaccggacgaaatcacaaacatggctaataaa
atcaaagaagcggtccaacacttgactgatattgaccccattattgaagctaccaaagat
gatttacggagagttaacagacttagggaaaacgctgaatatgccaaaacgaatgcgtca
aaaatattgaccgatgccgccgacgtgactagtactttagaaaacacaacaatcgcgcaa
gataatgcccaaagcgcaattgacacagcctggaatgacatcaacattgtgaacgatcgg
ttaaaacagattggctcgaaaacacagtcggcccaaaaaaagacaaacaatacagccgac
gacctcaaaaaactcgaggaacaactcaatcagcttcaacgaaacataaccgataacgga
atctacgccaatcgtgtcgtaaacgaatcgtcaaacattttggaaaaagcccggacaact
tacgacgacttcaacgaactccaggcacagtattccaaagttcaacgcaatttaacaacg
agtttagacaaagttcagtcgtcgaaagaccgcgctaatgatcttttcaagcgtgcgtgg
gaacttgttgccaaagtaacgagtactgaagaggaaattagcaaactggagaacagttcc
caacaagcgactttaactaatttggaaaatatactacaagatttgataaggcggatgaat
ggctacaatcaaaaaatacaggagagagtgcattactacaaacagtgtaattaa
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integrated database retrieval system