Tribolium castaneum (red flour beetle): 661396
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Entry
661396 CDS
T01046
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
661396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
661396
03041 Spliceosome [BR:
tca03041
]
661396
03036 Chromosome and associated proteins [BR:
tca03036
]
661396
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
661396
Spliceosome [BR:
tca03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
661396
Complex B
661396
Complex C
U2 SnRNP specific factors
661396
Chromosome and associated proteins [BR:
tca03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
661396
TFTC complex
661396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
661396
NCBI-ProteinID:
XP_008198998
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All DBs
Position
LG3:complement(25309287..25320957)
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AA seq
480 aa
AA seq
DB search
MYLYNLTLQRATAITHAIHGNFSGTKMQEIVISRGKSLEVLRPDPNTGKVHTLLTVEIFG
VVRSLMSFRLTGGTKDFVIVGSDSGRIVILEYIPSKNNFEKVHQETFGKSGVRRIVPGQY
LATDPRGRAVMIGAVEKQKLAYILNRDVQARLTISSPLEAHKSNTLVYHMVGVDVGYDNP
MFACLEIDYEEADSDPSGEAAQKTQQTLTFYELDLGVNHVVRKYSEPLEEHANFLVTVPG
GDDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVASAMCVLKTGFLFVTSEFGNHYLYQ
IAHLGDDDDELEFSSAMPLEEGDTFFFAPRSLRNLVLVDEMESLSPILSCRVADLAGEDT
PQLYMLCGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRSDDGDWFACRSAGVR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacaacctgaccttacaaagggccacagccatcacccacgccatccatggc
aatttttccggcaccaaaatgcaagaaattgtcatttcacgtggcaaaagcttggaagtg
ctacggcctgaccccaacaccggtaaagtccacacgcttctaaccgtcgaaatattcgga
gtcgtccgctcgttgatgtcgtttcgactcaccggaggcaccaaagacttcgtcatcgtg
ggctccgactccggcagaatcgttattcttgagtatatcccgtctaaaaacaacttcgag
aaggtccaccaggagacgttcggcaaatcgggggtcagacgtattgttccaggccagtac
ctagccactgaccctcgaggacgtgctgtaatgataggcgccgtcgagaaacaaaaactc
gcttacattttgaatagagacgtgcaagcccgcttgacgatctcctcgcccctcgaagcc
cacaaaagcaacactcttgtctatcacatggtgggggtggacgtcggttatgacaaccct
atgttcgcttgcctcgaaatcgactacgaagaagcagattcggatccttctggcgaagcg
gctcaaaaaactcaacaaaccttgaccttctacgagctggacctgggtgtaaatcacgtt
gtgcggaaatactcggaaccgttggaggaacacgcgaatttcttagtcacggttccaggg
ggcgacgatggcccttcaggagtccttatttgttcagagaattatttgacttataagaat
ttgggcgatcagcacgatattcgttgcccgattcccagaaggcggaacgatttggatgac
ccagagagaggcatgatttttgtctgttctgccacgcataagacgaagtcgatgttcttt
ttcctggcacagacggagcaaggggatatctttaaaatcactctcgaaacggatgaagat
atggtcacggaaatcaagttaaagtatttcgatactgttccggtcgcttccgctatgtgt
gtgttgaagacggggttcttgtttgtaacttcggaatttggcaaccactacttgtatcag
atcgcccatcttggtgacgacgacgatgagttggagtttagctccgctatgcccttagaa
gaaggtgacactttttttttcgcgcctcgttcccttcgtaacttggttttggtcgacgaa
atggaatcgctttcaccgattctatcttgtcgagttgctgatctggcaggtgaagacact
cctcaattgtatatgctttgcggaagaggcccgagatcctcattgcgggttctacgacac
ggtctcgaagtgtctgagatggccgtgtccgagcttcctggcaatcccaacgccgtttgg
acggttaagagaagaagtgacgatggcgattggtttgcttgtcgttctgcgggagtaaga
tga
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