Tribolium castaneum (red flour beetle): 661417
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Entry
661417 CDS
T01046
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
661417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
661417
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
661417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
661417
NCBI-ProteinID:
XP_972667
UniProt:
D2A0W4
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Position
LG4:7848012..7849262
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AA seq
271 aa
AA seq
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MSEQYKILHPVKYFRDHLAHKIRPDGREFGEYRPIVVNLGSISTADGSAIAKVGRTTVVC
GIKAELCQPKAEAANEGFLIPNVELPPLCSSKFRPGPPTEQAQVATQLVADILKNSDCLD
LKTLCIFPDKLAWCLYADLICLDLDGALIDACVVALMAALKSVTLPAVQYDPALDNKQVN
VQERKALSVTNTPIATTFAMFDDKILIDPTVDEEDLSTSLVTIVVKEEELCFVHKPGGCV
FTEEQLLKCVEESTKRATVIEEIIETAFKSL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaatacaagattttgcaccccgtcaagtacttccgcgaccacttggcccac
aaaatccgacctgatgggcgcgaatttggggaatatcgccccatcgtggtcaatttgggc
tcaatttcgacagccgatgggtctgcgattgccaaagttggtcgcacgacggtagtttgc
ggcattaaagcggagttgtgtcagcccaaggctgaggctgcaaacgaggggtttttgatc
cccaatgtggaattaccaccgttgtgttcgtcaaaatttcggccaggacccccaactgaa
caagcccaagtagcgacccagttagttgccgatattttaaaaaactctgattgtttagac
ttaaaaacgttatgtatatttccagacaaattagcttggtgtttatatgctgatttaatt
tgtttggatttggatggggcgttgatagacgcgtgtgttgttgcgttaatggcagcgctt
aagtcagttactttgccagcggttcagtacgatccagcccttgacaacaagcaagtgaat
gtgcaagagaggaaagctcttagtgttaccaacactccaatagcaacaacgtttgcaatg
tttgatgataaaattctcatagacccaacagtggatgaggaggacttaagtacgtctttg
gtgacaattgtggtgaaggaagaagagttgtgttttgttcacaagccaggtggctgtgtt
tttacggaagagcaacttttaaagtgtgtggaagaaagtacaaaacgtgcaactgtgatt
gaggaaattatagaaacagcttttaaaagtttataa
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