Tribolium castaneum (red flour beetle): 661461
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Entry
661461 CDS
T01046
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tca03009
]
661461
Ribosome biogenesis [BR:
tca03009
]
Eukaryotic type
90S particles
Other 90S particles
661461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
TPR_19
Suf
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
TPR_16
HAT_Syf1_M
TPR_8
CsrA
ARM_TT21_N
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
661461
NCBI-ProteinID:
XP_008193304
UniProt:
D6WKF7
LinkDB
All DBs
Position
LG5:6470421..6475890
Genome browser
AA seq
1442 aa
AA seq
DB search
METENFPRGGKKIQGNGEQTKRKHEESLFKIAKPPKAKKARKEVVPRKEKITEDLWQGSI
KLQGTLTYDRVQDGMVVLACIRRFSNLSVQVEFPGLTYGAVAINNISDVFTASITKELKA
NNDLSCINSVRDMLSVGQLIPTKILSVNKEEKGHKIQASINPRDVNAGRIHSSFKKGALI
WANVVSKLDHGYELTIGVNNCRVFLPFKNTDESKNYVLGEPLFCVIHKVVSSNSATTLSV
SAKHDHVHRALMQDDLSISDLIPGMKVDFFVEEILPHGIKGQLAENCYAYVDETFTFSRI
KKERIKEGKSIPAYVLFVEPVTKVTYLSLRGLEKLPEPELTIGQVCSAQILYNVPKGLYL
QLNQTETGFISNKRLLKTLPKGADVDIVSAIRKKYPNGSRHQCRVLDYNHMQQLYICTFE
KQVIKEKIFTVSDLKIGQAVTAQVTKVVTNGLITKVGHVQGFVPNLQLSNAKFTQNIKAK
FTVGMTVNARVLNITDGNVILTLKQGLVESDKCLATLEQLIPCSQYVGFVVQVKVAGALV
AFYGDIKGWISNRVLNHASSGHYLDPREYFFIGQVVTVWVLGIKNDKLHLSLNAPKGQNK
HKIKIGQTDNGSVTKIHSDGLDVKLSNYEVKATIPLAHLSTNLSLCPVLLRSYQVGQEIE
NIICIKNSGVAPVMSRREFIELKNQTSNKHANKIPKYRHLRKGAFLRCSFEGVGDGGIYV
SSPIQDYHENIFVANDNINYKQGTLPEFEKQQSIIAKIVNLEAGIKKIELSIDCQNMVNP
SLIDSLNTLSATLEDLSYILELRSQQNDKLTEYKIGQRVKCKVKNVDEDGNEIAILPNGV
EGRVSTYLSTSNAKIGSVVEGVVLDYNFDENYVYICSNNALKEKINKVQDGVIAKPFGSS
SVAKVLLITKFYVLGVLKHTQFNKQLVYLPLFENAVCGKQIKVVVDRNAGNKIVGLLKRF
VLSLKKETKLQAKKLQKGKKVEKTVEKEKCIQEEENDVEEDSDEEIVIEEEALSDEEIVS
DEEALSDEEIVSEEEALSDEEIVSEEEALNDEEIVSEEEEEALNDEEIVDKQNEESKENI
SDSEDEDSAKPKITTLDQSSNAETPKESVLSGAQSFYSTEDNNLKEESSEEEEEEIDQSK
KKKKLTPAERAEIAKKEEERISKIENELADSTIPPQSAEQFDRLLLANPNSSKLWLQYMS
MHIATTELDKARAVGKRALDTINMTLVKEKYNVWIALLNLENMYGTKESFDKTFEEAVRC
NDSLEIYLNVIQMLATSGKLQEMEEKIKKVRAKEKQNTKMWLEISRIYYSLGQFKEARNV
KESALKSILDKKRQFDLIVKFGIMEFQLGELDQAVANFETILDTYPSKVNIWIIYVDQLV
RKKNFEAARKTLERAISQKFAMKTMKVLFQKFISFEEQYGSPESVEDIKSKAKEYLASLG
VK
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaaattttccccgaggagggaaaaaaattcaaggcaatggtgaacagacg
aaacgaaaacatgaggaaagtttgttcaaaattgcaaaaccaccaaaagcaaaaaaggcc
cggaaagaggttgtaccaagaaaagaaaaaattactgaagacttgtggcaaggttcgata
aaattacaagggactttaacatacgatagggtacaagacggaatggtagttctagcttgc
ataagacgcttttcgaatttgtctgtgcaagtggaatttcctggccttacttacggggct
gtggctatcaacaacatttcagatgtatttaccgcctcaataacaaaagaactgaaagca
aataatgatttatcatgtataaactctgtcagagatatgctttctgtgggacaattaata
ccaacaaaaatattatctgttaataaagaagaaaagggccacaaaattcaagcaagcata
aatccaagagacgtaaatgctggccgaatacattcttcatttaaaaaaggcgcactaata
tgggctaacgtagtgtctaaacttgatcatggctacgaattaacaataggtgtgaacaat
tgcagagtctttttacctttcaaaaatactgatgagtcgaaaaattacgtactgggagag
cctttattctgtgtaatacacaaagtagtgagttccaacagtgcaacaactttgtcagtc
agcgcaaaacacgatcatgttcatagagctctaatgcaggatgatctaagcattagcgat
ctaattccagggatgaaagtggatttttttgttgaagagatattgcctcatggaattaag
gggcaattggcagaaaactgctacgcttatgtggatgaaactttcacattttcacggatt
aaaaaggaaagaatcaaggaaggaaaatctataccagcgtatgtcttgttcgtggaacct
gttactaaagtaacatacctttcattgcgtggtcttgagaaattacctgagccagaattg
accatcggtcaagtttgttcggcccaaattttgtacaacgtgcccaaaggcttatatttg
caattgaaccaaactgaaacgggttttatttcgaacaagcgtcttttgaaaaccttgccc
aaaggggcagatgtagacattgtcagcgccatacgaaaaaaatatccgaatggtagtcgg
caccaatgtcgtgtcttggactacaatcacatgcagcagttgtatatttgcacatttgaa
aagcaagtaattaaggaaaaaatattcactgtcagtgacttaaaaataggacaagcagtg
acggcacaagtgactaaagtggttacaaatggcttgattaccaaagtggggcatgtgcaa
gggtttgtgccaaatttgcagctgtcaaatgctaagttcacccaaaatattaaagcgaaa
tttacggttgggatgactgtaaatgcgagagttttaaatatcacggacgggaatgtaatt
ctcacactaaagcaaggtttagtggagtctgacaagtgtttagcgacacttgaacagctt
atcccttgctctcaatatgttggtttcgtcgttcaagtgaaagtagcaggggcgctggtt
gcgttttatggagatattaaaggttggatcagcaatagagtcttgaaccatgccagttct
gggcattatttggatccacgtgaatatttttttataggacaagtggtgactgtgtgggtt
ttggggatcaaaaatgataagctacacttgtcgttgaatgcgccaaaaggacaaaataaa
cacaagataaaaattggacaaactgacaatggttcagttacaaagattcattccgatgga
cttgatgtgaaactttcaaattatgaagttaaagccactattccgttggcacatttgagt
acgaatttaagtttgtgtcctgttttattaagatcttatcaagtaggacaagagatagaa
aatatcatatgcattaaaaattctggtgttgcacctgtaatgagtagaagagaatttatc
gaattaaaaaatcaaacatccaacaaacatgcaaacaaaattccgaaatatcgccacttg
agaaagggggcgtttttaagatgctcatttgaaggagttggagacggcggaatttatgtc
tccagccctatacaagattatcacgaaaacatattcgtagcaaatgataacataaattac
aagcaaggaacgttacccgaatttgaaaaacaacagtctattattgcaaaaattgtaaac
ctagaagctggtatcaaaaaaattgagttgtccattgattgtcaaaatatggtaaatcca
agcctaattgattctttaaatacactgagcgcaacacttgaagatttaagttacatttta
gagcttcgcagccaacaaaacgataaacttactgagtataaaatcggtcaacgagtgaaa
tgtaaggtaaaaaatgtggatgaagacggaaatgaaatcgcaattttaccaaacggtgtt
gagggtagagtttccacttatttaagcacatcaaatgcgaaaattggttcggttgtggag
ggcgttgttttggattacaattttgacgaaaactacgtctatatttgttcgaacaacgct
cttaaagaaaaaatcaacaaggtacaagatggtgtgattgcgaaaccttttggctcgtct
tctgtggcaaaagtattgttaattacaaagttttacgtattgggggttttgaaacatact
caattcaacaagcagttggtatatttacccctctttgaaaatgctgtttgtggaaaacaa
ataaaagttgttgtcgatagaaatgcgggaaataaaatcgtagggctgttgaaaagattc
gtattgtctttaaaaaaagaaactaaactacaagcaaaaaaactgcaaaaagggaagaaa
gttgaaaagactgttgaaaaagagaaatgcatccaggaagaggaaaatgatgtggaagag
gacagtgatgaagaaattgtgattgaagaagaagctctgagcgatgaagaaattgtgagt
gacgaagaagctctgagtgatgaagaaattgtgagtgaggaagaagctcttagtgatgag
gaaattgtgagtgaggaagaagctctgaatgatgaggaaattgtaagtgaagaagaagaa
gaagctctgaatgatgaagaaattgtggataagcaaaatgaagaatctaaagaaaatatc
tccgatagcgaggacgaggatagtgctaaaccaaaaattacaactcttgatcagtcaagc
aatgcagaaacaccaaaggaatctgttttatccggcgcgcagtcattttattcgactgaa
gataataatttgaaagaagaatcttctgaagaagaagaagaggagattgaccaaagtaag
aagaagaaaaaacttacgccagcagaaagagcagaaatagcaaagaaagaagaagaaagg
atttccaaaatagaaaatgaattagctgattcaacgattccaccacagagcgcagaacag
tttgatcgactgttactagccaatcctaattcgtcgaaattatggttgcagtacatgtct
atgcatatcgcgacaactgaattggacaaggctagagctgtaggaaaacgcgctctggat
acaataaatatgacgctagttaaagagaagtataatgtttggatcgctttacttaatcta
gaaaacatgtacggaaccaaggaatcgtttgataaaactttcgaagaggcagttagatgt
aacgactcgttggaaatatatttgaacgttatacaaatgcttgcaacatctgggaagttg
caagaaatggaggaaaaaattaagaaagttagggccaaggaaaaacaaaacactaaaatg
tggttggaaataagccgaatttattattctttggggcaattcaaagaggcccgaaatgtg
aaagaatcggcattgaagtcaattctggacaaaaaacgacaatttgatctcattgtgaaa
ttcggaataatggaatttcagttgggtgagttagatcaagcggttgctaatttcgaaaca
attttggatacttacccaagtaaggtcaatatttggattatttacgttgaccagttggta
cgaaaaaagaactttgaggccgcaaggaaaactcttgaaagagccattagtcaaaagttt
gccatgaagactatgaaagtgctgttccaaaagttcattagttttgaagaacagtatggg
agtcccgaatcggtagaagacatcaaaagtaaggcaaaagaatatcttgcttcgttgggt
gtcaaatga
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