Tribolium castaneum (red flour beetle): 661487
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Entry
661487 CDS
T01046
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tca01002
]
661487
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tca04121
]
661487
Enzymes [BR:
tca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
661487
Peptidases and inhibitors [BR:
tca01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
661487
Ubiquitin system [BR:
tca04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
661487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
GCIP_N
DUF2014
Motif
Other DBs
NCBI-GeneID:
661487
NCBI-ProteinID:
XP_008200471
UniProt:
D6WKR1
LinkDB
All DBs
Position
LG5:7523621..7540649
Genome browser
AA seq
2458 aa
AA seq
DB search
MTIATRGQGVTGENLDVQGPAPGPSEATTDELPNENAEPDFPHDKLASLDEKISNIRWVV
PVLPDQELECLLKVSIDLARKNLDTRSEACQRFFREGLTTSFTKILTDDAVSSWKANIHA
CIHNNCLKLIELCVAKLSHDWFPLLDLLAMVLNPNNKFHTFNSSRQSETAGPGSTLSEEE
LFARPSNDLRNPRGWLVDLINRFGELGGFQLLLDRFQSGKNLSVSVVFALLRPFGLCYEF
LTPHTINKFILPILEMVPGILEKLTDDELKREAKNESKSDIVSAIIKSSKNLASRVPNQE
ELIRTLEGFRLTMILRQLQISSFNGKMNALNEINKVISSVSYYPNRHHGIEEEEYLTPER
MAKWINENRVLEIVLRDSLHQPQYVEKLEKILRFVIKERALSLKDLDAVWAAQAGKHEAI
VKNVHDLLAKLAWDFSADQLDHLFECFQNSWTSASKRQRERLLELIRRLAEDDKDGVMAH
KVLTLFWNLAHAEDVTTEIMDQALSAHVKILDYSCSQERDAQKTVWLDKCVEELKNGEIW
VLPALKQIREICLLYEQNTNGGHGQRTHHMYYRQEVIERLQSQHSLVILVTNSLTSYMDH
LRNLYKEQPELTSETYVPDGRYCHALQVQERLNFLRFLLKDGQLWLCKEQAKQIWQCLAE
NAVFQSDREACFKWFSKLMGEEPDLDPGINKDFFENNILTLDPLLLTESGIKCFERFFKA
VNTKAEKLKLKRRSLLTEDPDLIGLDYLWKVVTLCPDDIAERAIELLREVSTNLGPRLQQ
SQMEFHENFITECHDRLRAHYDTVTVLQKSENDKDFNKNQMQNRIRAEAVKMCRVMRVLH
EYISECDIAFLGERKILPLYRACRGKHLAVIVRFSSPSRQVEDLEMFTHSNDTLASLRRH
ILRRIKPGVHCKLELFINGEPLDPADDRKLLSQMPIRDKMLISAKVMQVNSNMASSQDSS
SDSSTSSPQHPYDGPNIEAENLLPGVLMSTQHVYAQFFCQLSHLGSVLEYPPLRDGGYGL
LQLMPCDTETTEKLRILFTTPGEQNITMDNMFFSATPAEVLYNLEVLYAMLMPAIEPLSE
KTYEFQYSFMTSGEAHLFLEMLTKNNFMSSADNVTRRSAYLVVLKICKLILTSVAHVLVR
LSEDHTPPETEPSSENITTPGMHLRSALRTIPGHSDQILRQVSMKLSQGLSQLMVAETGS
TGQAQALFSQALNWELPDLNTTLALLRLVWAASSDNLNALNASPEVLHSLADPKKRNVPL
ELHTNEILLVKEALELLSIALVLNPSSLQHLYHDKRWPYFITDLVLLNPSCAVRIAAAEQ
LIIICTCGAASRLALQLITPLLFSLLDTLVLENANTSHELFQLLSQLVNVAYLTGCPLQN
ADALLAKEVAWLRKARDKNEVLIEGHLTLTKELLHFLTPEQKCELGSADTGSFIKELLED
FLFPASKLMLQLSKTGLLGEDPAIPVCDTPQTQAAAFNLLISLCLNCVQNFKQLVSMLTE
MFYSDPETAIVEWDYLPTIGPRPFQGFVGLKNAGATCYMNSVLQQLYMVESIREGILAAE
GAATDPNEDFTGEERLELDADCTDDRNCFDDNRKDYNVGILKQVQAIFGHLACSRLQYYV
PRGLWRHFKLQGEPVNLREQQDAVEFFMSLIESLDEALKTLGHEQIMSKILGGSYSDQKI
CKGCPHRYSKEEPFSVISVDIRNHSSLQDSMEQYVKGELLEGADAYYCEKCAKKVVTVKR
LCVKKLPPILGIQLKRFEYDFERVCAIKFNDYFEFPRDLDMEPYTVSGLAKIEGEIIDCD
LDPNASDTCTKYRLSGIVVHSGQASGGHYYSYIRHRDASGDVRWYKFDDGDVSECRMGED
DEMKVQCFGGDYMGEVFDPMLKRTTYRRQKRWWNAYMLFYTRHDVEENDLTKAMNEMKIS
GRKETHLKMPLAIENSIRKQNIKFLHHRSQFSIEYFSFIKKLASSCAQPNPRPGQSNDLI
EQQTLLSVQLLSNFLFHTGWHTKKNLRGPAMDWCDVLCMHLRFSPAIRSWFAHNMLFSHM
HRFCDYLLSCPSNEVRSAFIKIIVLLAHFSINDGPCPCPPGMNNPDPNASLSDHVLWALL
GLLQREVSEHGRHLPHYCSVFHMYANQGVQEKAQLLKMNVPATFMLVALDEGPGPAIKYQ
YTELGKLNQLVSCLIRCCDVSSKCQSSTGGPILPNPYADPMCPDYIMPISPQAADILYNR
SSYIKKVIEDTNLTDEAIKLLQFCSWENPHFSRTVLSELLWQIAFAYCQELRHHIEILLS
VLVIEDSWQTHRIHNAIKGVPEEREGLLETIVRAKNHYQKRAYQCIKCMVALFSKCQAAR
IMLNNQADLRRTWTASVAWLQDELERKYPASTQYAYSTWSPPAQSNDSSNGYFLERSNSA
RKTLERALELMPDLEREEEDVSEEQESQEEVVETAQSEEAKPELPDITQSCEHTPNTY
NT seq
7377 nt
NT seq
+upstream
nt +downstream
nt
atgactattgcaacgagaggtcagggagttacaggagaaaacttggatgtgcaaggtcca
gctcctgggccgtcagaggcaaccactgacgaattaccaaacgaaaatgccgaacccgat
ttcccccacgataaactagcgtctttagacgagaaaatatcaaatataagatgggtggtg
ccagtgttgcccgaccaagaactagaatgtttactcaaagtttcaatcgatttagcgcga
aaaaatttggatacgagatcagaggcgtgtcagcggttctttcgtgagggccttaccacc
tccttcaccaaaatcctcactgacgacgccgtctcgagctggaaggcgaatatccatgcc
tgcatccacaataactgcttgaaattgattgaattatgtgttgccaaactgtctcacgat
tggtttccgctgctggatttgttggcgatggtcttgaacccaaataataagtttcacacc
ttcaattcgtcaagacagagtgaaacggctggccctgggtcgactttgagtgaagaggaa
ttgtttgctagaccgtctaatgatcttagaaaccccagagggtggttggttgatctcata
aatcggtttggggaacttgggggattccagttgctgttagataggtttcaaagtggtaaa
aatttaagtgtctctgttgtatttgcacttctgcgaccgtttggactttgttacgaattt
ttaactccgcatacgatcaacaagtttattctacccatattggaaatggttcctggcata
ttagaaaaactgaccgacgatgaattaaagagagaagcaaaaaacgaaagtaaaagcgac
attgtctcagctataataaaatcatcaaaaaacctagcctcgcgcgttcccaatcaagaa
gaactaatccgaactcttgaaggtttccgtctcactatgattttaagacagttgcaaatt
tccagttttaatggaaaaatgaacgcattaaacgaaataaataaagtcatttctagcgtt
agttactatccaaatagacatcacggaattgaggaagaggaatatctaacaccagaaaga
atggccaaatggattaatgaaaatcgcgtcttggaaatcgttttgcgcgactcgctccac
caaccccagtacgtggaaaagctggagaaaattctacgtttcgtaataaaagaacgagcg
ttgagtctcaaagacttggacgctgtgtgggcagctcaagccgggaaacacgaagctatc
gtgaaaaacgtccacgatttactcgcgaagctcgcatgggacttcagcgccgaccagttg
gaccatttgttcgagtgttttcaaaacagttggacgtcggcatcgaagcgtcaaagagaa
agattgttggagctgattcggcgattggctgaagacgacaaagacggcgtgatggcacat
aaagtattgacgcttttttggaatttggcgcacgctgaagacgtaacgacggagatcatg
gatcaggcgttgtccgcacacgtgaaaatcctcgattatagttgttcgcaggagagagat
gcgcagaaaactgtgtggttggataagtgcgttgaggaattgaagaatggggaaatatgg
gtgttgcccgctttgaaacagatacgcgagatatgcttgttgtatgagcagaatacgaac
ggggggcatgggcagaggacgcatcatatgtattaccgacaggaggttatcgagagattg
caaagtcaacactcgctcgttattttagttacgaatagtcttacgagttacatggatcat
ctacgtaatctttataaggaacagccagaattgactagcgaaacttatgttcccgatgga
cgctactgccatgccttgcaagttcaagagagactgaattttctcagatttctcctaaaa
gacggacaactgtggctgtgcaaagagcaggctaagcagatctggcagtgtctggctgaa
aacgcagtgtttcaatcggaccgtgaagcctgtttcaagtggttttctaagctaatgggt
gaagaacccgacttagatcccggaataaacaaagactttttcgaaaacaatattcttacg
ctcgatccacttttgctcaccgaaagcggtatcaaatgtttcgaacgttttttcaaagca
gtcaacacaaaggctgaaaaacttaaactgaaacggcgctccctacttaccgaagatccc
gatctgatcggtttagactacttgtggaaagtggtaactttatgtcctgatgatattgcc
gaaagagcgattgaattattacgcgaggtcagtacgaatctagggccgagattgcagcag
tcgcagatggaattccacgagaattttataacggagtgtcacgacagactgcgtgctcat
tacgatacggtcacagtattgcaaaagtcggaaaacgacaaagattttaataagaatcaa
atgcagaataggatcagagccgaggctgtgaagatgtgtagagtgatgcgtgtcctgcat
gagtatataagtgaatgtgatattgcttttttgggggagaggaaaatcctgccgttgtat
cgcgcctgcagagggaaacatttggcggtgattgtgcgcttttcgagtcctagtcggcaa
gtggaagacttggaaatgttcacgcactcgaacgatacgttggcgtcgctgcgtcggcac
attttgcgccggattaagccgggggttcactgcaaattggagctttttattaacggggaa
cccctggatccggccgacgatcgcaagttgttgtcgcagatgccgatccgggataaaatg
cttatttcggcaaaggtgatgcaagtcaattccaatatggcatcgtcgcaagacagcagt
tccgatagttcaacttcgtccccgcaacatccctacgacggacctaacattgaagcggaa
aatttgttaccaggtgttctcatgtcgactcaacacgtctacgctcagtttttctgtcaa
ttgtctcatctcggcagcgttttggagtaccccccgctgcgagacggaggctacggactt
ctccaattaatgccctgtgatactgaaacaacggaaaaattgcgaattctttttaccact
cccggggaacaaaatatcacgatggataatatgtttttcagtgcgactccagctgaagtc
ttgtataacttggaagtgctgtatgcgatgctaatgccagcgatagaaccgttatcggaa
aaaacgtacgaatttcagtacagctttatgacgtcgggtgaagcccacctattcctagaa
atgttaacgaaaaacaactttatgtcaagtgccgacaatgttactcgtagatcagcatat
ttagtagttttaaaaatttgcaaacttattttaacttctgttgcgcatgtacttgtgaga
ttgagcgaggatcacacaccgccggaaacagaaccgagcagtgaaaacatcacaacgccc
ggaatgcatctacgatcggcgctacggacgattcctggacattctgatcagattttgcgg
caggtgtcgatgaagttatctcaggggctctcccagttgatggtcgcagagacgggtagc
acgggccaggcgcaggccttgttcagtcaggcgctaaactgggaactgcccgatttgaac
acaacattggcactgttgcgtttggtgtgggcagcaagtagcgacaatttgaacgctttg
aacgcctcgcctgaggtgcttcactccctcgccgatccaaagaaacgcaacgtaccgtta
gaattgcacaccaacgagattctcttggtgaaagaagcattagaactgctcagcatcgct
ctagtcctgaaccctagtagtttgcagcatctttatcacgacaaaaggtggccttacttt
atcacggatttagttctattaaatccgagctgcgccgttcgcatcgccgccgccgaacaa
ctgatcatcatttgtacatgtggtgctgcgagcagattagctctccagttaatcacgcct
ttgttgttctccttgttggacacgttagtgttggaaaatgcaaatacgtcgcacgaactt
tttcaattgttgagtcagttagtgaacgttgcttatttgacgggttgtccgttacaaaac
gctgacgctttattagccaaagaagtcgcttggttgcgcaaagcgagagataaaaacgag
gttcttattgaaggacatttgacgttgacgaaggaactacttcattttctcacgccggag
caaaaatgtgaattgggaagtgccgataccggaagttttatcaaggaattgctcgaagat
tttctctttccggccagcaagttgatgttgcagttgagcaaaacgggactgttgggcgaa
gatcccgcgataccggtctgcgatacgccgcagacacaagcagcagcttttaatcttttg
atttcgctgtgtttgaactgtgttcagaattttaagcagttggtcagcatgctgacggaa
atgttctattcggatcctgagacagcgatagtggaatgggattatctgcccaccattggt
cctcgtccatttcaaggtttcgtcggtttgaagaacgccggcgccacctgttacatgaat
tcggtgttgcaacagttgtacatggtggagagcatccgcgaaggcattttggcggccgaa
ggcgcggccaccgacccgaacgaggatttcaccggcgaagaacgtctggaattagacgct
gattgcaccgacgatcgcaactgtttcgacgataaccgaaaagattacaacgtcggtatt
ctgaagcaggtacaagcaatattcggtcacttggcctgttcacgccttcaatactatgtg
cctaggggactttggagacattttaaacttcaaggtgagccagttaatctgcgggaacaa
caggacgctgtagaatttttcatgtcgcttatagaaagtttagacgaggcgttgaaaacc
ctcggacacgaacagatcatgtccaagattttgggcggttcgtattctgatcaaaaaatt
tgtaaaggctgtcctcatcggtattcgaaagaggagccgttcagtgttattagtgtagat
ataaggaatcatagcagtttgcaagattcaatggagcagtatgtcaaaggggaattgttg
gagggcgctgacgcttattattgcgagaagtgcgccaaaaaagtagtaacagtgaagcga
ctgtgtgtcaagaagctgccgcctattttaggaatacagttgaagcgatttgaatatgat
tttgaacgagtttgtgccatcaagtttaacgactattttgagttccctagagatttggat
atggagccgtatacagtttcaggattggcgaaaatcgaaggggagattatagactgtgat
ttagatcccaatgcaagtgatacttgtactaaatatcgcctgtctgggatagttgtacat
tcaggtcaagcctcaggtggtcactattattcgtatattagacaccgggacgcttccggt
gacgtcaggtggtataaattcgacgacggtgacgtgtcagagtgtcgaatgggcgaagac
gacgaaatgaaagtccagtgttttgggggcgattacatgggggaggtttttgacccgatg
ttgaaacgaacgacgtatagaagacagaaacggtggtggaacgcctatatgctcttctac
accagacacgacgtcgaagaaaacgacttaacgaaagcgatgaacgaaatgaaaatttca
ggcagaaaagaaactcatctgaaaatgccgctggcaatagagaacagcatccgcaagcaa
aacatcaaattcctccaccatcggagtcaattctcgatagaatatttttcgtttattaaa
aaactagcgagtagttgcgcgcagccaaaccctcgtcctggccaatcaaatgatttgatt
gagcaacaaactctactcagcgtccaactgctcagcaactttctgtttcatacagggtgg
catacgaagaagaacttgcgcgggcctgcaatggactggtgcgatgtgctgtgcatgcac
ttgcgcttttccccggcaatccgctcgtggtttgcccataacatgttgttcagtcacatg
cacagattctgcgactacctgctcagctgtccgagtaacgaagttaggtccgcttttatt
aaaatcatcgttttattggcgcacttttcgatcaatgacgggccgtgtccttgtccccct
gggatgaataatcccgatccgaacgcgtcgttgagtgatcatgtgttgtgggcgcttttg
gggctactacaaagggaagtgagcgaacacgggcgtcatttgccgcattattgttccgtt
tttcacatgtatgccaatcaaggcgtgcaggagaaggctcaacttttgaaaatgaacgtg
ccagctacgtttatgttggtcgcgttggacgagggtccaggaccggcgattaaataccag
tatacagaattaggaaagttaaatcaattagtttcatgtttgatacgttgctgtgatgtt
agttccaaatgccagtcgagtacgggtggccccattttacctaatccgtatgcggatcct
atgtgtcccgattatattatgccgatatctcctcaagccgccgatattctctataatcgt
tctagttatatcaaaaaagtaatcgaggacaccaatttaaccgacgaagccatcaaactc
ctccagttctgttcgtgggagaaccctcacttttcgcgcaccgttctctctgaactgctg
tggcagatcgcattcgcctactgtcaggaacttcgccatcacatcgagatactcctgtcc
gtgttagtgatcgaggactcgtggcaaacccaccgcatccacaacgcaatcaaaggcgtt
cccgaggaacgcgaaggtcttctagagacaatagtacgtgccaagaatcattatcagaaa
cgagcttatcagtgcataaaatgcatggtggcgctgttcagcaaatgccaagccgctcgc
atcatgctgaacaatcaggcggacctgaggcggacttggaccgcctccgtggcctggctc
caggacgagctggagcgaaagtacccagccagcacccagtacgcttacagcacttggtcg
ccgccggctcagagcaacgacagctcgaacggctacttcctggagcggtcgaacagcgcg
aggaagacgctggaaagggcgctggagctgatgccggacctggagcgggaggaggaggac
gtgagcgaagagcaggaatctcaggaggaggtggtggagacggcgcaaagcgaggaagcc
aagcccgagctgcctgatatcacacaaagttgcgaacacactcctaacacgtactag
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integrated database retrieval system
