Tribolium castaneum (red flour beetle): 661609
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Entry
661609 CDS
T01046
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
661609
09122 Translation
03013 Nucleocytoplasmic transport
661609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
661609
03041 Spliceosome [BR:
tca03041
]
661609
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
661609
Spliceosome [BR:
tca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
661609
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
661609
NCBI-ProteinID:
XP_972853
UniProt:
D6WXN9
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All DBs
Position
LG8:complement(11603444..11606279)
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AA seq
679 aa
AA seq
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MVKESSSLKKKRKSGTSADNEAEIDIYKKSVEFEEKEALNRPNDTDAQIYFNTCKEIRHL
FAEISELKMKSGSDVRAKITEKTTEVCLLLVLLKKLNRMEKVRLVFPKEQLAAEKQKVDS
INLQYQNLLYEANHLMSEYRKCFQFKSKDEHIELVPVEEFLAEAPKNLTTKFKKFDETDE
MAKHELRLARLEWELQQRIHLADMCKKLEEEKKKLEGDIAERRNKLDKLGPLLSSVMEAT
KPVQEHLGLHIDKIQAEHKLASLLPNPLYLFYANIDAYRQVNDSGMSVEIMGDQEEASQW
KELELAEDEEEEEEDMEPEAEIQEVEEIVETKKRRHRKSVHVDPLEEKKRKLLQVHPLSV
QVTVTTKDGPSIKIRLSYYAKLEIVTVSSSVNIPSNITGNAAREVLSNESVLVELVEGDF
GLDSPNPCTPYQLKKVGLGSFQSLVPELGYVYTWAQKMCGIDFLNKMSGSDQLSQTNVES
VMKTIKKRLKSRYALAKQLEELERNVIPVLPASVDLPRTTISSLTKWSSGTYQSFCEAKF
TEGLLEAELISPNDIFYKATITRDKANLQAFVVIKNDYPSIPPIFALCLNYNGTRHSQND
DNIRDMERSINVDWNHEFSNANWLLSAQIMSLCVGLDIYLETEDPGTFQQNTMYIKSTCA
RNRRKPFKFRNIGVGVYTQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagagtcaagtagtttgaaaaaaaagcgcaaaagtgggactagtgccgacaat
gaggccgaaatcgacatttataaaaaatcggtcgaatttgaggagaaagaggccctcaat
cgaccgaacgataccgacgctcagatttacttcaacacgtgcaaagaaattcggcattta
ttcgccgaaataagtgaactgaaaatgaagagtgggtctgatgtcagggctaaaattacg
gaaaaaaccaccgaagtgtgtctattattggtgcttttgaaaaaactgaaccgcatggag
aaggtgcgtttggtttttccaaaagaacaattggctgcggaaaaacaaaaagtggacagt
attaatttacaatatcagaacttgttgtacgaggctaaccatctgatgtcggaatatcgc
aaatgtttccagttcaagtctaaagacgagcacatcgagctggtccccgttgaggagttc
ctcgccgaagcgccgaaaaatttaacgacaaaattcaaaaaatttgatgaaaccgacgaa
atggcgaagcacgagctgcggctcgcgcgcctcgagtgggagctccagcagcgtattcat
ttggccgacatgtgcaaaaaacttgaagaggagaagaaaaaactagagggggatattgcc
gaacgtcgcaataaattggataaattggggcccctcttgtcttcggtcatggaggccacg
aaaccggtgcaggagcacctggggctccacattgacaagatccaggctgaacacaagctt
gcctcgcttctacccaaccccctttacttgttttatgccaatattgacgcctacagacag
gtgaacgactcggggatgagtgtggagattatgggggaccaggaggaggctagtcaatgg
aaggagttggagttggcagaggatgaagaagaggaggaggaggacatggaaccggaagct
gagatacaggaggtggaggaaattgtcgaaacgaagaaacggcgtcaccggaagtcggta
catgttgatccacttgaggagaaaaaacgcaagttgttacaagttcacccgctttctgta
caagttactgtcactactaaagacggtccttcaattaaaattcgactaagttattacgca
aaattggaaatcgtcactgtatcttcaagcgtcaatattccgagcaatattacaggaaac
gcagctcgtgaggtcttatcaaacgaaagcgtcctcgtggagctggtggagggcgacttc
gggctggacagccccaacccgtgcaccccttaccaactgaaaaaagtcggcttggggtcc
ttccaaagcctcgtcccagagcttggctacgtctacacgtgggcgcaaaaaatgtgcggc
attgattttttgaataaaatgtccggttcggatcaactgagccaaactaacgtcgagtcg
gtcatgaaaacaataaaaaagcgcctaaagtcgcggtatgccttggcgaaacaattggag
gagttggagcggaatgtgattcctgttttgccggctagtgtcgatttgccgcgaaccacg
atttcgagtcttacgaaatggtcatcagggacgtatcaaagcttttgcgaggctaaattt
acggagggtttgctagaagctgagttaatttcgccgaatgatattttctataaagcgaca
atcacgcgtgataaagcaaatttgcaagcttttgttgttatcaagaacgattatccgtca
attccaccaatttttgcgctttgtttgaactataacgggactagacattcgcagaatgat
gataatattcgggacatggaacggtcgattaatgtcgattggaaccacgaattttcaaat
gcaaattggcttttgtcggcccagattatgtcattgtgtgtcggactggacatttatctg
gaaacggaggaccctgggacgtttcaacagaacaccatgtatattaaatcgacttgcgcc
agaaataggagaaagccgttcaaattcaggaatattggggttggggtctacacccaatga
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