KEGG   Tribolium castaneum (red flour beetle): 661609
Entry
661609            CDS       T01046                                 
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03013  Nucleocytoplasmic transport
tca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    661609
  09122 Translation
   03013 Nucleocytoplasmic transport
    661609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    661609
   03041 Spliceosome [BR:tca03041]
    661609
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     661609
Spliceosome [BR:tca03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    661609
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 661609
NCBI-ProteinID: XP_972853
UniProt: D6WXN9
LinkDB
Position
LG8:complement(11603444..11606279)
AA seq 679 aa
MVKESSSLKKKRKSGTSADNEAEIDIYKKSVEFEEKEALNRPNDTDAQIYFNTCKEIRHL
FAEISELKMKSGSDVRAKITEKTTEVCLLLVLLKKLNRMEKVRLVFPKEQLAAEKQKVDS
INLQYQNLLYEANHLMSEYRKCFQFKSKDEHIELVPVEEFLAEAPKNLTTKFKKFDETDE
MAKHELRLARLEWELQQRIHLADMCKKLEEEKKKLEGDIAERRNKLDKLGPLLSSVMEAT
KPVQEHLGLHIDKIQAEHKLASLLPNPLYLFYANIDAYRQVNDSGMSVEIMGDQEEASQW
KELELAEDEEEEEEDMEPEAEIQEVEEIVETKKRRHRKSVHVDPLEEKKRKLLQVHPLSV
QVTVTTKDGPSIKIRLSYYAKLEIVTVSSSVNIPSNITGNAAREVLSNESVLVELVEGDF
GLDSPNPCTPYQLKKVGLGSFQSLVPELGYVYTWAQKMCGIDFLNKMSGSDQLSQTNVES
VMKTIKKRLKSRYALAKQLEELERNVIPVLPASVDLPRTTISSLTKWSSGTYQSFCEAKF
TEGLLEAELISPNDIFYKATITRDKANLQAFVVIKNDYPSIPPIFALCLNYNGTRHSQND
DNIRDMERSINVDWNHEFSNANWLLSAQIMSLCVGLDIYLETEDPGTFQQNTMYIKSTCA
RNRRKPFKFRNIGVGVYTQ
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggttaaagagtcaagtagtttgaaaaaaaagcgcaaaagtgggactagtgccgacaat
gaggccgaaatcgacatttataaaaaatcggtcgaatttgaggagaaagaggccctcaat
cgaccgaacgataccgacgctcagatttacttcaacacgtgcaaagaaattcggcattta
ttcgccgaaataagtgaactgaaaatgaagagtgggtctgatgtcagggctaaaattacg
gaaaaaaccaccgaagtgtgtctattattggtgcttttgaaaaaactgaaccgcatggag
aaggtgcgtttggtttttccaaaagaacaattggctgcggaaaaacaaaaagtggacagt
attaatttacaatatcagaacttgttgtacgaggctaaccatctgatgtcggaatatcgc
aaatgtttccagttcaagtctaaagacgagcacatcgagctggtccccgttgaggagttc
ctcgccgaagcgccgaaaaatttaacgacaaaattcaaaaaatttgatgaaaccgacgaa
atggcgaagcacgagctgcggctcgcgcgcctcgagtgggagctccagcagcgtattcat
ttggccgacatgtgcaaaaaacttgaagaggagaagaaaaaactagagggggatattgcc
gaacgtcgcaataaattggataaattggggcccctcttgtcttcggtcatggaggccacg
aaaccggtgcaggagcacctggggctccacattgacaagatccaggctgaacacaagctt
gcctcgcttctacccaaccccctttacttgttttatgccaatattgacgcctacagacag
gtgaacgactcggggatgagtgtggagattatgggggaccaggaggaggctagtcaatgg
aaggagttggagttggcagaggatgaagaagaggaggaggaggacatggaaccggaagct
gagatacaggaggtggaggaaattgtcgaaacgaagaaacggcgtcaccggaagtcggta
catgttgatccacttgaggagaaaaaacgcaagttgttacaagttcacccgctttctgta
caagttactgtcactactaaagacggtccttcaattaaaattcgactaagttattacgca
aaattggaaatcgtcactgtatcttcaagcgtcaatattccgagcaatattacaggaaac
gcagctcgtgaggtcttatcaaacgaaagcgtcctcgtggagctggtggagggcgacttc
gggctggacagccccaacccgtgcaccccttaccaactgaaaaaagtcggcttggggtcc
ttccaaagcctcgtcccagagcttggctacgtctacacgtgggcgcaaaaaatgtgcggc
attgattttttgaataaaatgtccggttcggatcaactgagccaaactaacgtcgagtcg
gtcatgaaaacaataaaaaagcgcctaaagtcgcggtatgccttggcgaaacaattggag
gagttggagcggaatgtgattcctgttttgccggctagtgtcgatttgccgcgaaccacg
atttcgagtcttacgaaatggtcatcagggacgtatcaaagcttttgcgaggctaaattt
acggagggtttgctagaagctgagttaatttcgccgaatgatattttctataaagcgaca
atcacgcgtgataaagcaaatttgcaagcttttgttgttatcaagaacgattatccgtca
attccaccaatttttgcgctttgtttgaactataacgggactagacattcgcagaatgat
gataatattcgggacatggaacggtcgattaatgtcgattggaaccacgaattttcaaat
gcaaattggcttttgtcggcccagattatgtcattgtgtgtcggactggacatttatctg
gaaacggaggaccctgggacgtttcaacagaacaccatgtatattaaatcgacttgcgcc
agaaataggagaaagccgttcaaattcaggaatattggggttggggtctacacccaatga

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