Tribolium castaneum (red flour beetle): 661942
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Entry
661942 CDS
T01046
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca04120
Ubiquitin mediated proteolysis
tca04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
661942
04120 Ubiquitin mediated proteolysis
661942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tca04121
]
661942
Enzymes [BR:
tca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
661942
Ubiquitin system [BR:
tca04121
]
Ubiquitin ligases (E3)
U-box type E3
661942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
WASH-7_C
Motif
Other DBs
NCBI-GeneID:
661942
NCBI-ProteinID:
XP_973165
UniProt:
D6WWC9
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All DBs
Position
LG8:complement(7921920..7937014)
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AA seq
1126 aa
AA seq
DB search
MSELSQEEMRRRRLARLAVLDNVLPSGSVSPPVTPVSQSPAAQHSPPTTPEKDFEGVFQV
PSKPIDMPSGSKSRRPPPQRSDSETSSIHMEVDEASGCADKAGANTDIDSGFENMEVDET
DVQKKDAPRQRTSSSATEITEEQLLATVLRILHSTLEQPSESRIYLPQTATDVKTHPQTS
IRDIISNALMEIIVQISQGNNPFKDLIPSNDTADTSSINSLSPSPSPSHTCPIPTLPIKR
VEVAETPLNLALNYLMDCYNRVSVEERNHPKRSSIPPLSDVLTEVRAQLVHYTTLLLQGF
IIANDELYKFGRSPLLSPILQQTLPRGFLTELVTRTHTNTSLFSSVFSPLLQGLYRMMQN
ASIVGEEHRMPIQTLFELADIRCGSRPICTLITKQVQFMLEPCTPAQGREVVRTSFLGPF
LSVSVFAEDEPKVAEKFFSGNSSSDKSLNHTLQLELENTRNLQHRIFHYLLANPESRDGC
LNYLAKVLKYNEKRAQLQMEERSLAGDGFMLNLLSVLQMLSMKIKLDKMDFLYPFHSESL
ICIKNDTRLKYTSQDVATWLESLEKTHQFQTPNFSTICWFLTLHCHHLALLPALQKYQRR
IRAIRDLQKLLDETVAAEAQWRNTPFANRNKQFIKRWKQQLKKLNKSKACADAGLLDKNL
MRRALIFYTSVAQYLLSLMTNMAPGSPVPSLPLPPNVPEAFSALPEWYVEDIAEFLLFAL
PYFPTVITENMEDSLITWLLVTICSSNMVKNPYLVAKLVEVVFIIIPTFQPRCEMLYDRF
MSHEISRSVLPSALMKFYTDVETTGSSSEFYDKFSIRYHISLIIKGMWNSAIHRQTLVNE
SKSGKQFVKFVNMLMNDTTFLLDESLESLKRIHEVQELISDEEKWSKMNSEQQQSRMRQL
TADERQCRSYLTLARETVDMFHYLTVDIKEPFLRPELVDRLASMLNFNLQQLCGPKCKNL
KVRNPDKYGWEPRRLLSQLVDIYLHLDCEEFAAALAGDERSFRKDLFDDAAARLERLSIK
TPVEIERFKALADKAYHVYQNNQKSDDWMSDAPDEFKDPLMDTLMTDPVLLPSGQVMDRS
VIMRHLLNSSTDPFNRQPLTEDMLQPVNELKERIRIWKSEKTRSAN
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactgtcgcaagaagagatgcgtcgacggcgactggcccgcctggcagtcctg
gacaacgtcttgccctccggctcggtctcgccgcccgtgacccccgtctcgcagtcgccg
gcggcgcagcacagccccccgaccacccccgagaaggacttcgagggggtgttccaggtg
cccagcaagcccatcgacatgccctccggctccaagagccgcaggccgccgccccagcgg
agcgactcggagacgagctccatacacatggaggtggacgaggccagcgggtgcgccgac
aaggcgggggccaacacggacatcgactcggggttcgaaaatatggaggtcgacgagacc
gacgtccagaagaaagacgcccctcgtcaacgaacatcatcctcagcgaccgaaatcacc
gaagaacaactcctagcaacggtcctccgcatcctccattccaccctcgaacaaccatcc
gaaagtcgcatttatctccctcaaaccgccaccgacgtcaaaacccaccctcaaacctca
atccgcgacatcatctccaacgcactgatggaaatcatcgtccaaatctcacaaggcaat
aaccccttcaaagacctgatcccgagcaacgacacagccgacaccagcagcataaactcg
ctaagtccctcccccagccctagccacacctgccccatacccaccctgccaatcaaacga
gtggaagtggcggaaacgcccctaaacctagcactgaattacctaatggattgctacaat
cgtgtgagcgtcgaggaacgaaaccacccgaagcgatcgagtattcccccgttaagtgac
gttttaacggaagttcgggcacaactggtgcactacacaacgttgttactccaaggtttt
atcatagccaatgacgagttgtacaaattcgggcgttcgccccttttgagccccattttg
cagcagacgctcccgcgggggttcctcaccgagctggtgacccgaacccacacgaacacg
tcgttgttctcgtcggttttctcgccactgcttcagggactttaccgaatgatgcagaac
gcgagtatcgtgggcgaggagcaccgaatgccgatccagacattgttcgagttggccgat
attcggtgcggcagccgccccatctgtacgctaatcacgaaacaagtgcaatttatgctg
gagccgtgtacgcctgcgcaaggccgcgaagttgtccgaacgtcgtttctcgggccgttt
ctgtcggtgtcggtgttcgccgaagacgagccgaaagtggccgagaagttcttctcgggg
aattcgtcgagtgataagagtttgaatcatacgctgcagctggagctggagaatacgcgg
aatttgcaacatagaatttttcattatttgttggcgaatccggagagtcgtgatgggtgt
ttgaattatttggcgaaggttttgaagtataatgagaagagggcgcagctgcagatggag
gagaggtcgctggctggggacgggtttatgttgaatttgttaagtgttttgcaaatgttg
tcgatgaagattaagttggataagatggattttttgtatccgtttcattccgaaagtttg
atttgtattaagaatgatacgaggttgaagtatacgtcgcaggatgtcgccacgtggctg
gagagtttggaaaaaacccaccaattccaaacgcccaacttttcgacaatttgttggttc
ttgacactccactgccatcacctcgccctccttcccgcactccaaaaataccaacgtcgc
attcgcgccattcgtgatctacaaaaactcctcgacgaaacggtggctgcggaagcacag
tggcgtaacacaccgttcgccaatcgcaataaacagtttatcaaacggtggaaacaacaa
ttgaaaaaattgaacaaatctaaagcgtgcgctgatgccggactactagataagaatcta
atgcgacgcgctttgattttttacacctcagtcgctcagtatttactgagtctgatgaca
aatatggcgccggggagtcccgtgccgagtctaccactgccgccgaacgtacccgaagca
ttctcggcgcttcccgaatggtacgtcgaagatatagccgagtttcttctatttgcctta
ccatatttcccgaccgtcatcacggagaacatggaagattccctaatcacgtggttgcta
gtgacaatttgttcctccaacatggtcaaaaatccctacttggtggccaaactggtcgaa
gtcgtcttcataataatcccaacgtttcaaccgcgttgcgaaatgttgtacgaccgtttc
atgtcgcacgaaatttcacgaagtgtgctacccagtgccctgatgaagttctacaccgat
gtcgaaacgaccggctccagttcggaattttacgacaagttttcaatccgttaccatatc
agtctcataattaaaggcatgtggaactcggcaatacatcgccaaacgctcgtcaacgaa
tcaaaatcaggaaaacagttcgtcaaattcgtcaatatgctaatgaacgacaccactttc
ctcctcgacgagagtctcgaaagtttgaaacgcatccacgaagtgcaagagttgataagc
gatgaggagaaatggtcgaaaatgaattcggaacagcagcaaagtcggatgagacaattg
acagccgatgagagacagtgtcgctcctacttgactctagctcgtgaaactgtcgatatg
tttcactacttaacggttgatattaaggagccgtttttgcgaccggaacttgttgatcgt
ttagcgtcgatgcttaattttaatttgcaacaattgtgtggcccgaaatgtaaaaatttg
aaagtgagaaatccggataagtatggctgggagccgcgacggttgttgagtcaattggtt
gatatttatctgcatttggactgcgaggagttcgccgccgctttggccggcgatgagaga
tctttccggaaagatttgtttgacgacgcagcggcgcgattagagcgcctgtcaatcaaa
actccggttgagatcgaacggtttaaggccttggccgataaggcgtatcacgtgtatcaa
aataaccagaaaagtgatgactggatgagcgacgcccctgacgaattcaaggatccctta
atggacactttgatgactgatcctgtgttgttgcccagtgggcaggtgatggacaggtcc
gtcattatgaggcatttgttgaatagcagtacggacccgtttaatcggcaaccattgact
gaagatatgctgcagccagtgaatgagttgaaggagcgcattaggatatggaaatcagaa
aagacacgttcggcaaattaa
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