Tribolium castaneum (red flour beetle): 662288
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Entry
662288 CDS
T01046
Name
(RefSeq) uncharacterized LOC662288
KO
K10980
non-homologous end-joining factor 1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
662288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tca03400
]
662288
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
662288
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Motif
Pfam:
XLF
XLF_CC
XRCC4
PAXX
Motif
Other DBs
NCBI-GeneID:
662288
NCBI-ProteinID:
XP_976419
BEETLEBASE:
TC000406
UniProt:
D6WAF8
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All DBs
Position
LG2:complement(11892998..11894299)
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AA seq
238 aa
AA seq
DB search
MWKTFQHGENLYMIKIVQDDNLRLVVTDFQNIWVQDVSRDELLQQFQEANPLFDIKIEEV
GSEVIEAINSISDCTNVEMVESDEGLKLILNTIKSEYKIRFKFNLLKSPSETFLKEITVP
LIQTVKHLEERQSMLINLLHKKDRELEEYKLEKGLISRDDLITEKFDVEKLSSIDDKLMM
NVFGQNETFWNCFVGQHGNIEANIEDVKQDPWNHIKRKRKVYSSKTVTKKGKGINYDN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagacgtttcagcatggggagaatttatacatgattaaaatcgtgcaagacgac
aacctgagacttgtcgtgactgattttcaaaatatctgggttcaagatgtctccagagac
gaacttctgcaacaatttcaagaagctaaccctctgtttgatattaaaatagaagaggtt
gggtctgaagttatagaggctataaacagcatttctgattgcactaatgttgaaatggtg
gagagtgatgaggggctaaagctgatcctaaacaccataaagtctgaatataaaatacgg
ttcaagtttaacttacttaagtcaccatcagaaacttttttaaaagaaattacagtgccc
ttaattcagacagtgaaacacttggaagaacgtcagagcatgttaattaatttacttcat
aaaaaagatagagaactggaagaatataaacttgagaaaggtttaatttccagagacgac
ttaattactgaaaaattcgatgtagaaaagctgagttctatcgatgataaattaatgatg
aacgtttttggacaaaatgagacgttttggaactgttttgtgggtcaacatggcaacata
gaagccaacattgaagatgtgaagcaggatccttggaatcatataaaacgtaaaagaaaa
gtttattcctcaaaaaccgtcaccaaaaagggtaaaggcattaactacgacaattaa
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