Tribolium castaneum (red flour beetle): 662387
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Entry
662387 CDS
T01046
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03440
Homologous recombination
tca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
662387
03460 Fanconi anemia pathway
662387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tca03032
]
662387
03400 DNA repair and recombination proteins [BR:
tca03400
]
662387
Enzymes [BR:
tca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
662387
DNA replication proteins [BR:
tca03032
]
Eukaryotic type
DNA Topoisomerases
662387
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
662387
FA (Fanconi anemia) pathway
662387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC
Zn_ribbon_recom
DUF7082
Motif
Other DBs
NCBI-GeneID:
662387
NCBI-ProteinID:
XP_973578
LinkDB
All DBs
Position
LG8:12893815..12898353
Genome browser
AA seq
976 aa
AA seq
DB search
MGCLLISSLLNVSARFCSTGARPAIMRYLNVAEKNDAAKNIAAILSRGASQRREGFSPYN
KIYEFDATVMGQQAHMIMTSVSGHLLNYEFGPSFRNWKSCNPVALFDAPVVKMCPEDYQK
IKRTLEREIRSCQGLIIWTDCDREGENIGFEIIKVCSDVKPNLRIYRAKFSEITAASIFR
ALNTLGQPNKNVSDAVDVRQELDLRTGAAFTRLQTLRLQRVFPQKLADRLISYGSCQFPT
LGFVVERYQAIQDFIPEPFWKIKMNHTVNDITTEFTWKRDRLFDKNACEAILDICKESPN
ATVEKVEGKPKSKWRPLPLDTVEMEKTVSRKLKITAKDTMKIAEKLYTQGLISYPRTETN
IFPKELNLANLVTLQQNDQRWGAFAHRIMNEGGPAPRQGKKSDQAHPPIHPTKHADNLTG
NEQRVYEYIVRHFLACVHKDAQGFETVVTADIAGEKFTAKGLIILEKNYLEVYTYEKWNA
KEIHSYQQGDTFIPSVLELYEGATAPPKLLTEADLIALMEKHGIGTDATHAEHIDTIKTR
EYVGLHENIYFVPGTLGMGLVEGYNNIGLEVSLAKPILRADFEKDLKLICDGLKDPEVVR
REQIQKYRAVFETVVEKMRQIDECLANRLADRPQVVEDEHYENVEVRPVLKCPKCGNDMT
IRNKKNNAGKFISCTGYPDCRNAIWLSQNVETIEVLDESCPQCGPNVKLVKMKFKQNVFV
GEPNPNTLCIGGCDINVLEALDINLSSVKRTNGVRNNQNHNIHQANANNVPNNNHNNGHT
QNHPNPRRDSWPSNTTTFNPTPGPSGPSNRSNTTMNQDDIVCACNLEAVQLTVRKDGPNK
GRKFYKCKNQTCDFFLWASDEPSNANTTINSQQQNDVKCKCDLPASRRTVSKEGPNKGRP
FYCCPKPMGQGCGFFQWADEDNDGGGDGGPGDDGHGGGPQRRAPKTKTSRGAPPYRAKRK
CSKCGQEGHTKNKCPN
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgggatgtttactaatttcctcattactaaatgtaagcgcacgattctgtagcactggg
gcacgtccagcaatcatgagatacctaaacgtggccgagaaaaacgatgccgccaaaaat
atcgctgcaattctgtcccggggggcttcacagaggcgtgagggcttctcgccctacaac
aaaatctacgaattcgacgcgaccgtgatgggccaacaggcccacatgatcatgacttcg
gtttcaggccatttattaaattacgaattcgggcccagttttcgcaactggaagtcgtgc
aatcctgttgcactgttcgacgcaccggttgttaaaatgtgcccggaagattaccaaaaa
attaagcgcactttagagcgggaaatcaggtcgtgtcaggggctgataatctggaccgat
tgcgatcgcgaaggggaaaatatcgggtttgaaataatcaaggtttgtagcgacgttaag
cccaatttgaggatttatcgcgccaagttttccgaaatcacggccgcttccatatttagg
gccctaaatacgctaggacaacccaacaagaacgtaagtgacgcggttgatgtacgacaa
gagttggacttgaggacaggagctgcttttaccagattgcaaaccctgcggttacagaga
gttttcccccaaaagctcgccgatagactgataagttacggctcttgccagttccccact
ttggggtttgtggtagaaaggtaccaagccattcaggatttcatcccagaaccgttttgg
aaaatcaaaatgaatcacactgtgaacgacataacgaccgaattcacgtggaaacgcgac
cgcctcttcgacaaaaacgcctgcgaggcaattttggacatttgtaaggaatctccaaac
gcaaccgtcgaaaaggtcgaaggcaagcccaaaagcaagtggcgccctttgcccctagac
accgtcgaaatggagaaaaccgtctcccgaaaactcaaaatcacggctaaagacacgatg
aaaatcgccgaaaaactgtacactcaagggttgatcagttacccccgaaccgaaacaaac
atcttccctaaggaattaaacttagcgaacttggtaacattgcaacaaaacgaccaacgt
tggggcgctttcgcgcaccgcataatgaacgaagggggccccgctcccagacagggcaaa
aagtcagaccaggcccaccctcccatacacccaacaaaacacgcggataatttaacggga
aatgagcaacgcgtttacgaatacatcgtgcgccatttcctagcttgcgtccacaaggac
gctcaaggtttcgaaaccgtggtcacggcggacattgctggggaaaaattcacagccaaa
gggctaataatcttggaaaaaaactacctcgaagtgtacacctacgaaaaatggaacgcc
aaagaaatccacagctaccaacaaggcgacactttcatcccctcagttttggagctttac
gaaggcgcaactgcgcccccgaagttactaaccgaagccgacttgatcgcgttgatggaa
aagcacggcattgggaccgatgccacccacgccgagcacatcgacactatcaaaacgcgg
gaatacgtgggcttgcatgaaaatatttatttcgtcccgggcacccttggcatgggcctg
gttgagggttacaataatatcgggctagaagtgagtctggctaagccgattctacgggcc
gattttgagaaggacttgaagctgatttgcgacggtttgaaagacccggaagttgtgcgg
agagaacaaattcagaaatatcgggcggtttttgaaactgtggttgagaaaatgaggcaa
attgacgaatgcttggctaatcggctggctgatcggccacaggtcgttgaggatgaacac
tatgagaatgtggaagttaggccggttttgaaatgtccaaaatgtgggaatgatatgacc
attaggaacaaaaaaaataacgcggggaagtttatctcgtgtacgggttatccagactgt
cggaatgcgatctggttgtcgcaaaatgtggagactattgaagttttggacgagagttgt
ccgcagtgcggacctaatgtaaaactagtaaaaatgaaattcaaacaaaacgtttttgtt
ggcgaacctaaccctaacacactctgtatcggaggctgcgatatcaacgtcttggaagct
ttagacatcaacctttcgtcagttaaaagaacaaacggggtacgaaataaccaaaatcac
aatattcaccaagcaaacgctaacaacgtcccgaataataatcataataacggccacact
caaaaccacccaaacccacgtcgtgacagttggccctcaaataccaccacatttaaccca
actcctggcccttcaggaccatcaaaccgctcaaacacaaccatgaaccaggacgacatc
gtctgcgcttgcaacttagaggccgtacaactaaccgtacgcaaagacggccccaacaaa
ggccgcaaattctacaagtgcaaaaaccaaacttgtgattttttcctgtgggcctcagac
gagccctcaaatgccaacaccacaataaacagtcagcagcaaaacgacgttaaatgcaag
tgcgatttaccagcgtctcggcggacggtgtcaaaagagggccccaacaaagggcgcccc
ttttactgttgcccgaaaccgatgggacaaggatgcgggtttttccaatgggcggatgag
gacaacgatgggggcggtgacggcggccccggcgatgacggacacgggggtggcccccag
cgacgagcccccaaaacaaaaactagccgaggcgcgccaccttaccgggcgaaacgaaaa
tgtagcaagtgcggacaagagggccacacaaaaaacaagtgccccaattga
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