Tribolium castaneum (red flour beetle): 662733
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Entry
662733 CDS
T01046
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
tca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
662733
03015 mRNA surveillance pathway
662733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
662733
Enzymes [BR:
tca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
662733
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
662733
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
662733
NCBI-ProteinID:
XP_973907
UniProt:
D6WJW8
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All DBs
Position
LG5:4882702..4886256
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AA seq
458 aa
AA seq
DB search
MSQKIDWAKFAEEQEKSVQKKLGDVSLSSNRNNSTAEASLLRKLMRNGLVESKTDIEIQR
QNPNSPLYSVKTFEALNLNPNLLKGVYDMGFNAPSKIQETALPTLLANPPQNLIAQAQSG
TGKTAAFVLAMLSRVDASLKYPQVLCLSPTYELAIQTGEVAAHMAKFCPEIEMKYAVRGE
EVSRGSHLTEHIIIGTPGKVLDWALKFRVFDLKKLTVFVLDEADVMIATQGHQDQCIRIH
KNLGPNCQMMFFSATYDQQIMEFAEMIVPDSITIRLKREEESLDNIQQYYVKCSGPQEKY
NAVTNIYGTVGVGQAIIFCHTRRTASWLAEKMSKDGHAVAVLTGDLTVEQRINVLDRFRS
GQEKVLITTNVLSRGIDVEQVTIVVNFDLPIDMQGKADCDTYLHRIGRTGRFGKQGIAIN
LVDSQEAMNICRDIEKHFNRKIHYLNADDSDEIEKIGA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaagatagattgggctaaatttgcggaagaacaggaaaaaagcgtccaaaag
aagttgggcgacgttagtctgagttcaaatagaaacaactccactgccgaggctagtttg
ctgcgaaaattgatgcgaaatggtctcgtggaaagcaaaactgatatcgagatccagagg
caaaacccgaactcgccgctttattctgttaaaactttcgaagccctgaacttaaacccc
aatttattgaagggggtttacgatatggggttcaatgcgccgtcgaaaatccaggaaacg
gctctaccgaccctcttagccaaccctccacagaacctcatagctcaggcccagtcaggc
actgggaaaacggccgcttttgtcttagccatgttaagtcgcgtcgatgcttcgctaaag
tatcctcaagttttgtgtttgtcacccacttacgagctggctatccaaactggcgaagtg
gcggcacatatggcaaagttttgccccgaaatcgagatgaaatacgccgtgagaggcgaa
gaagtttcaagagggtcgcatttaaccgaacacatcataattggaacgcctggaaaagtg
ctagattgggccctgaaattccgtgttttcgatctgaaaaaactaacagtgtttgtcttg
gatgaggctgatgtgatgatcgcaacccaaggccaccaggatcaatgcatcagaatacac
aaaaatttggggccgaattgtcaaatgatgtttttctctgcaacgtacgatcaacagatt
atggagtttgctgaaatgattgttcccgattctatcacaataagactgaaacgcgaagaa
gaaagtctggataatatccaacaatattatgtcaaatgctctggaccacaggaaaaatat
aacgctgtgacgaatatttatggaactgtgggggtgggacaggcgatcattttttgtcac
accagacgcactgcgagctggctcgctgaaaaaatgtcgaaagatggccatgctgtggcc
gtcttaactggagatttaacggtggaacaacgtattaacgtcttagatcggttcaggtct
ggtcaagaaaaagttcttataaccaccaatgtattgtctagaggtattgacgtcgaacaa
gtgacaatcgttgtaaatttcgatttgccaatagacatgcaaggcaaggccgactgcgac
acttacttgcacagaatcggtcgaactggacgttttggtaaacagggtattgctataaat
ctggttgattcacaagaggccatgaatatttgtcgcgatatcgagaaacattttaaccga
aaaattcattatttgaatgccgatgattcggacgaaattgagaaaattggagcctga
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