Tribolium castaneum (red flour beetle): 662779
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Entry
662779 CDS
T01046
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tca
Tribolium castaneum (red flour beetle)
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tca03016
]
662779
Enzymes [BR:
tca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
662779
Transfer RNA biogenesis [BR:
tca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
662779
Prokaryotic type
662779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
662779
NCBI-ProteinID:
XP_973949
UniProt:
D6WWF9
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All DBs
Position
LG8:complement(8206823..8210252)
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AA seq
668 aa
AA seq
DB search
MPKFDKKRTRNRFNPSFRGKTNRPQVHREYQHQNQLREIDVGITEFINTFEGFSGVIKAR
FSDFQVNEIDPDGQIAKLTNLEIPKFGTTVEKADAPADSPLSQIPQETWLGLKQMLDEAE
PPLIELDVSEMTKEDRTEIHKSLKKYFGGKISANTETKNDKKFMVFKKHDGKIDNRSNWP
SDKGEFVHFLVYKECLDTLDTALRIASCLKMPPAHFSYAGVKDRRAKTTQWFSVKRVEPW
KLMVKTRPIRNVKIGNITFKDKPLKLGDLTGNKFRIALRNVTGDDDLIEKSLKSLQDKGF
VNYYGLQRFGNDKEVPTFSVGIQLLLGNWKEACDIILKLTKSDQPDLDVSKAKKVYAETG
DPEKALAQFESKNSCIEYLLLSGLSKEHKNDYVNALASIPRNTRLLYIHSFQSLVWNLIA
SKRIEKYGLKVVPGDLILLENLKENSEDDEDCGENKKEPVKELTDEECANYTIYDIVLPL
PGYDITYPENMKDCYKEILEKYGLTLEMTRQKVRTYTLSGTYRKLMGQVQNLSWKIMYYN
DPNDNLIRSDLEELKGEKEPASVEGGKYKALLLDFCLDSSSYATMVLREILKSDTSSSSH
AKLNNYHVATAKPEEKTCEENEFSDKVGLLNDSQKYEAFKNIVFSEDDTSLKRKCEEENG
EKAKVAKT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaattcgacaaaaaacgcaccagaaaccgcttcaatcccagctttaggggaaaa
accaaccgaccgcaagtccaccgcgaataccagcaccaaaatcaattgcgcgaaatcgat
gtgggaattaccgaattcattaacacgtttgagggtttctctggcgtgatcaaagcccgc
ttttcggattttcaagtcaatgaaatcgaccccgacggccaaattgccaaactaacaaac
ttggaaatccccaagtttgggacaaccgtggaaaaagccgatgcaccggctgatagcccc
ttgtcccaaatcccgcaggagacatggctaggtttaaagcaaatgcttgacgaggcggag
ccgcctttgatcgaactcgacgtcagtgaaatgacaaaagaggatcgtacggaaattcac
aaatcgttgaaaaagtactttggagggaaaattagtgcaaatactgagacgaaaaacgat
aagaaatttatggtttttaaaaaacacgacggtaaaattgacaaccgctcgaactggccg
agtgataaaggggagtttgtccatttccttgtgtataaggaatgtctcgacacgttagac
accgccttaaggatcgcctcatgtttaaaaatgccccccgcacattttagttatgccggg
gttaaggaccgaagagcgaaaaccactcaatggttttcggtcaaaagagtcgaaccgtgg
aaactgatggtaaaaacgcgaccaattcgaaacgtaaagattggtaatatcactttcaaa
gacaagccgttaaaactaggcgacttgaccggtaataaattccgaatcgcgctcagaaat
gtgactggggacgacgatttgatcgaaaagtcgctcaaaagtctccaagacaaggggttt
gttaattattacgggttacaaaggtttgggaacgataaagaagtgcccacgttttcggtc
gggatacaacttttgttgggcaattggaaagaggcctgtgatattattttgaaactaaca
aagtcagaccagcccgatttggacgtctctaaagctaagaaagtatacgctgagacgggc
gaccctgaaaaggctttagctcaattcgagagcaaaaattcttgtatcgaatatttatta
ttgtcaggactgagcaaagaacataaaaatgactacgtcaatgctttagcgagtataccg
cgaaatacgagactcctttacattcactcgttccaaagtttggtttggaatttaattgcg
tcaaaacgaattgaaaaatacggccttaaggtcgtcccaggcgacttgattcttctcgaa
aatttaaaagaaaactcggaagatgacgaggattgtggcgaaaataaaaaagagcccgtg
aaagaactaaccgatgaagagtgcgccaattatacaatttatgacattgttttaccactg
ccgggttacgacattacatatccggaaaatatgaaagactgttacaaggaaattttagaa
aaatacggcctaactttagaaatgacgagacaaaaagtacgcacttatacgttaagtgga
acttatcgtaaattaatggggcaagtgcagaacctgtcgtggaaaataatgtactataac
gaccccaacgataatttaattaggtcagatttggaagaactgaaaggggagaaagaaccc
gcgagtgttgaaggaggaaaatacaaagcgctgctgctagatttttgcctcgactcatct
tcatatgccacaatggtgttacgcgaaattctaaaaagcgatacttcgagtagctcccac
gcgaaattaaataattaccatgtggcaacagcaaaacctgaggaaaaaacgtgtgaggaa
aatgagttttcggataaagttggattactcaacgactcacaaaagtacgaagctttcaaa
aatatagtcttcagtgaagacgatacaagtttgaaacgaaagtgtgaggaggagaatggg
gaaaaggcaaaggtcgcgaaaacgtaa
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