KEGG   Tribolium castaneum (red flour beetle): 662877
Entry
662877            CDS       T01046                                 
Name
(RefSeq) ATP-dependent RNA helicase WM6
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03013  Nucleocytoplasmic transport
tca03015  mRNA surveillance pathway
tca03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    662877
  09122 Translation
   03013 Nucleocytoplasmic transport
    662877
   03015 mRNA surveillance pathway
    662877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    662877
   03041 Spliceosome [BR:tca03041]
    662877
Enzymes [BR:tca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     662877
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     662877
Spliceosome [BR:tca03041]
 Complex C
  Other components
   EJC/TREX
    662877
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    662877
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 662877
NCBI-ProteinID: XP_974045
UniProt: D6WLU7
LinkDB
Position
LG5:10219519..10222332
AA seq 425 aa
MADADDLLDYEDEENPEQTVAETVGAGDQKKGIKGTYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHT
RELAFQISKEYERFSKYMPNIKVGVFFGGLSIQKDEEVLKNNCPHIVVGTPGRILALVRS
KKLNLKHLKHFILDECDKMLELLDMRRDVQEIYRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTEQNFPAIGIHRGMNQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAVTFVSEESDAKILNEVQDRFDVNITELPDEIDLST
YIEGR
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggccgatgccgatgatcttttagactacgaagacgaagaaaatccggaacaaaccgtt
gccgagaccgtcggggccggtgaccagaagaagggcatcaagggtacttacgtgtccatc
cacagttcaggcttcagggattttctcctgaaaccggaaattttgcgcgccattgttgac
tgcggttttgagcacccgtctgaagtgcaacacgaatgcatcccacaggcagttcttggt
atggacatcttgtgccaagccaagtccggtatgggcaagactgcagtgttcgtcctggcg
acgcttcagcagttggagccaaccgaaaacgtggtttacgtgcttgtaatgtgccacacg
cgcgaattggccttccaaatcagcaaagagtacgagcggttcagtaaatacatgccaaac
atcaaagtcggtgtgtttttcggcggcttgtctatacaaaaggacgaggaggtgttgaag
aataattgcccccatatcgtcgttgggacaccgggacgcatcctcgccttggtccggtcc
aagaaactcaatctcaagcatctcaaacatttcattcttgacgagtgcgacaagatgctg
gagttattagatatgaggagggacgtgcaagaaatttaccgtaacacgccgcacggcaag
caagtaatgatgttcagcgccaccctaagtaaagaaattcgccccgtctgcaagaagttt
atgcaagatccgatggaagtttatgtggacgatgaagcgaaattaactctgcacggactt
cagcaacattacgttaaactaaaggaaaatgagaaaaacaaaaaattgtttgagctgctt
gatgttttggaatttaaccaggttgttattttcgtcaaatcagtccaacgatgtattgct
ttggcgcaactattgacggaacagaatttccccgccattggcattcacagaggtatgaac
caagaagaacgtctttcacgttaccaacaatttaaagacttccaaaagagaattttggtc
gccacgaatttgtttggcagaggcatggatattgaacgagtaaatatcgtttttaactac
gacatgcctgaggattcagatacttacttacatcgtgtggcaagagctggtcgttttggt
actaaaggtcttgctgttacttttgtatcagaagaaagcgatgcgaaaatcttaaatgaa
gtgcaagacaggtttgatgttaacattacggaattaccggacgaaattgatctcagcaca
tatattgaaggacgatga

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