Tribolium castaneum (red flour beetle): 662877
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Entry
662877 CDS
T01046
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
tca03015
mRNA surveillance pathway
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
662877
09122 Translation
03013 Nucleocytoplasmic transport
662877
03015 mRNA surveillance pathway
662877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
662877
03041 Spliceosome [BR:
tca03041
]
662877
Enzymes [BR:
tca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
662877
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
662877
Spliceosome [BR:
tca03041
]
Complex C
Other components
EJC/TREX
662877
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
662877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
662877
NCBI-ProteinID:
XP_974045
UniProt:
D6WLU7
LinkDB
All DBs
Position
LG5:10219519..10222332
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AA seq
425 aa
AA seq
DB search
MADADDLLDYEDEENPEQTVAETVGAGDQKKGIKGTYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHT
RELAFQISKEYERFSKYMPNIKVGVFFGGLSIQKDEEVLKNNCPHIVVGTPGRILALVRS
KKLNLKHLKHFILDECDKMLELLDMRRDVQEIYRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTEQNFPAIGIHRGMNQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAVTFVSEESDAKILNEVQDRFDVNITELPDEIDLST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgccgatgatcttttagactacgaagacgaagaaaatccggaacaaaccgtt
gccgagaccgtcggggccggtgaccagaagaagggcatcaagggtacttacgtgtccatc
cacagttcaggcttcagggattttctcctgaaaccggaaattttgcgcgccattgttgac
tgcggttttgagcacccgtctgaagtgcaacacgaatgcatcccacaggcagttcttggt
atggacatcttgtgccaagccaagtccggtatgggcaagactgcagtgttcgtcctggcg
acgcttcagcagttggagccaaccgaaaacgtggtttacgtgcttgtaatgtgccacacg
cgcgaattggccttccaaatcagcaaagagtacgagcggttcagtaaatacatgccaaac
atcaaagtcggtgtgtttttcggcggcttgtctatacaaaaggacgaggaggtgttgaag
aataattgcccccatatcgtcgttgggacaccgggacgcatcctcgccttggtccggtcc
aagaaactcaatctcaagcatctcaaacatttcattcttgacgagtgcgacaagatgctg
gagttattagatatgaggagggacgtgcaagaaatttaccgtaacacgccgcacggcaag
caagtaatgatgttcagcgccaccctaagtaaagaaattcgccccgtctgcaagaagttt
atgcaagatccgatggaagtttatgtggacgatgaagcgaaattaactctgcacggactt
cagcaacattacgttaaactaaaggaaaatgagaaaaacaaaaaattgtttgagctgctt
gatgttttggaatttaaccaggttgttattttcgtcaaatcagtccaacgatgtattgct
ttggcgcaactattgacggaacagaatttccccgccattggcattcacagaggtatgaac
caagaagaacgtctttcacgttaccaacaatttaaagacttccaaaagagaattttggtc
gccacgaatttgtttggcagaggcatggatattgaacgagtaaatatcgtttttaactac
gacatgcctgaggattcagatacttacttacatcgtgtggcaagagctggtcgttttggt
actaaaggtcttgctgttacttttgtatcagaagaaagcgatgcgaaaatcttaaatgaa
gtgcaagacaggtttgatgttaacattacggaattaccggacgaaattgatctcagcaca
tatattgaaggacgatga
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