Tribolium castaneum (red flour beetle): 663288 Help Entry 663288            CDS       T01046                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism tca  Tribolium castaneum (red flour beetle) Pathway tca03013   Nucleocytoplasmic transport tca03040   Spliceosome Brite KEGG Orthology (KO) [BR:tca00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     663288   09122 Translation    03013 Nucleocytoplasmic transport     663288  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tca03019]     663288    03041 Spliceosome [BR:tca03041]     663288 Messenger RNA biogenesis [BR:tca03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      663288 Spliceosome [BR:tca03041]  Complex C   Other components    EJC/TREX     663288  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     663288 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 ATP-grasp_LDMS Motif Other DBs NCBI-GeneID:  663288 NCBI-ProteinID:  XP_008192636 UniProt:  D2A126 LinkDB All DBs Position LG4:complement(8396001..8404597) Genome browser AA seq 1501 aa AA seqDB search MAGVVSNDVWKSWEKSGKTEFVKTCMQLLKDDTKSPVFDKNGRVSSLITNINMLIDKGLK GQLKVEAVVSTLQELVSLHPDVPSVILDVLSITDSSCIPDSSNDDSKERNNLCFIIKECE KLLSDQLLKERLEIDTLQEVGILKNKTFYSKFIKVKTKLYYKQRKFNLFREECEGFAKLQ TELNQEFGENTSHEDVLDIVQSLIGCFNLDPNRVLDIILESFENKPKDARIFVPLICSYM KDPKIVSEVLASKFTFLRSSETNVPRSLYVLTAQLLQHNIISLDDIYLWLTPEDKIMFKE CDKAMKDAKEYVRKLQVISINNKEKEETPEEPENLMEKFNANQKLGLCEALLSVGDWNNA KNLINRLPDHYALSFQPIALALCKLLHYIVEPVYREFCKLGPKIKGKPIPRHENPLSPKQ ATSFLELRDHAIPMLITLGASLRFDPVLMYKVIRISKAALNSYGVESSKSPCPSGDTLYY DILTLLDTTILSSLSYMDCNCCIAEEVWTVLKLYPYQNRYCLYSRWKNETYSLYPDLLRK RGDSEKQIKNIMKRVSKENIKPVGRLIGKLTHCSPGFLFDYILLQIQVYSNLIHPVVDSL KYLTSLSYDVLGFCLVECLANADKKRVKHDSTSISSWLQSLSSFCGAVYKKYIIELTGLL QYVANQLKAQKSLDLLILKEIVQKMAGVEAAEDLTMEQVNAMAGGELLKAEAGYLSQVRN TKKSSLRLKEAMSEHNLAVALCLLMAQQNYCVVYRETQKNHLKLVGKLADQCQDTLVQFG TFLGSSLSVDEYVNKLPSIQSMLLDYHIPNEVAFFLARPMFNHAINIKYDQLRKSDPNYK KLSTNVKNQKYFEAVNEVMEPVHKSIIPLHPPKIWEDISPQFLSTFWSLTMYDLYVPDET YQQVVNKTRQQSLATIESSNNKGKKEQERYLTLVEKLQDEKKKQHEHVEKVMYRLKQEKD SWFLSRSAKSAKNETITRFLQLCLFPRCTFTSIDAVYCAKFVHVIHMLKTPNFSTLLCYD RLFCDVTYSITSCTENEAMRYGRFLYAMLETVMRWHKSKELFEKECANYPGFVTKYRLNN QHADNLDNVGYENYRHVCHKWHYKVAKAMVTCLDSKDYVQIRNSLIILIKIIPFFPVLQK VGQFIEKRIEKVRDEEKNNRQDLFTLSSSYLGLLKQRIMSGHMVKESDFHILVEKEKVVR SHEAKSEAGSSKHNGEVKEEMKDKSEKKIKAEDLKVVSRTSQGSQSSGDYNAWERPEPRE KHRREEKRDDFEKEREREKRRERKEEKLAKQEERQYREERYSEISPKDEMRYSSDRQVER YYDERGSHYYREVRDEREIGLSGSNNGSSSMGRHSQEPETDREVKRRKMDGSSLKSSKHE ERKLQQLDYMLEKTDKKERSGKAKEKREKLSDEEKELRKERKLGRKRDRTEEALQVEMKR RREEEKAAKLSHQNGEIMEPVHQREKHHRSRDLSPYPRERSHDDRLEMREKHRRSAENKR R NT seq 4506 nt NT seq  +upstreamnt  +downstreamnt atggcaggtgttgttagtaacgatgtttggaaaagttgggaaaaatcgggaaaaacagag tttgttaaaacatgcatgcagttgttgaaagatgacaccaagtccccggtttttgacaaa aatgggagagtctcaagtctcataaccaacataaatatgttgattgacaaaggactcaaa gggcagttgaaagtggaggctgttgtttcaacgctccaggaacttgtttctttacatcct gatgttccttcggtaattttagacgttttaagtatcacagactcttcttgcatacctgat agcagtaacgacgattcaaaagaaaggaacaatttgtgttttatcataaaagaatgtgaa aagttgctttcagaccaattgttgaaggaacggttagaaatagacacgctacaagaagtt gggatcttgaaaaacaaaacgttttattcaaagtttattaaagtgaagacaaaactatat tacaaacagcgcaaatttaacttatttcgcgaggaatgtgagggttttgcaaaattacaa acggaattgaaccaagagtttggcgaaaacaccagtcatgaggacgtcctagacattgtt caatcattaattggttgcttcaacctcgacccaaaccgagtccttgatataattctggag agttttgagaataaaccaaaagacgcgcgaattttcgttcctctaatatgctcgtatatg aaagacccgaaaatcgtgagtgaagttctagcatcgaaattcacttttttgcgaagcagc gaaacaaatgttcctcgatctctatacgtattaacggcgcagttgttacaacataacatt atatcactggacgacatttatctttggttaacacctgaggataaaatcatgtttaaagag tgcgataaagcaatgaaagatgcaaaagaatacgtgcgtaagctacaagtgatctcgata aataataaggagaaggaagaaacgcccgaagagccggaaaatctcatggaaaaatttaac gcgaaccaaaagttggggctttgcgaggcgttgctttcagtaggtgattggaacaatgcg aaaaatttgataaaccgtctgcctgatcactacgcactgtcattccaaccgatcgcgtta gcactgtgcaaattgttgcattacatcgttgaacctgtttatagagaattttgtaagttg ggaccaaaaatcaagggaaaacctatcccgcgccatgaaaatcccctcagcccgaaacaa gcaacctcatttttggaacttcgagatcatgccattcctatgttgattactttaggagct tcgctgcgttttgatcccgttttgatgtacaaagtgataagaatttccaaagcggcgtta aattcctatggagtagagtcgtcaaaatcgccttgtccgtctggtgatacgttatattac gacattttgactttgttggacacgacaatactgtcgtcactctcgtacatggattgcaat tgttgcatcgcagaggaagtgtggacggtcctcaaactctacccatatcagaataggtac tgtctttacagccggtggaaaaacgagacgtattctttataccccgacttgttacgaaaa cgcggagattccgaaaaacaaatcaaaaatatcatgaaacgagtcagtaaggaaaacatc aaacctgtaggccgcctcattggcaaactcacccactgttcacccggatttctgttcgat tatattttactccaaattcaagtttatagcaatttgattcacccagtcgtcgactctttg aaatatctgacgagtttatcgtacgatgttttgggcttttgcctcgttgaatgtctagcg aacgccgacaagaaacgggtaaaacatgatagcacttcgatctcttcgtggctacaaagt ctctcgagtttttgtggcgctgtttacaaaaaatacatcatagaattgaccgggcttttg cagtatgtggccaaccaacttaaagcgcaaaaaagtttggatttgctgattttgaaagaa atcgtccagaaaatggcaggtgttgaagccgccgaagacttgaccatggagcaagtgaac gcaatggcagggggcgaacttctgaaagccgaggccggttatttgagtcaagttcgcaac actaaaaaatcatcactgcggcttaaggaagcaatgtctgagcataatctagctgtggct ttgtgtttactgatggcccagcaaaattattgtgttgtctatcgggaaacgcagaagaat catttgaaattggtcgggaaattggccgatcaatgtcaggacactttggtccagtttggg acgtttctcggctcttctctttcagttgatgagtatgtgaataaattgccaagtatccag agtatgctcctcgattatcatattccaaacgaagttgccttcttcctggccaggcccatg ttcaaccatgccataaatataaagtacgatcagttgcgtaaatctgaccctaactacaag aaactctcaacgaacgtaaaaaaccagaaatatttcgaagcggtgaacgaagtgatggaa ccggtccacaaatctataattccgctccaccccccgaaaatctgggaggacatttcgccc caatttttatcaaccttttggtctttaacaatgtatgatctttacgtacctgacgaaacg taccaacaagtcgtgaataaaacgcgccaacaatcgttggcaacgatagaatcgagtaac aacaaaggtaaaaaagagcaagaacgttacttgaccctagtcgagaaactgcaagacgag aagaagaaacaacacgaacacgtggagaaagtaatgtataggttgaagcaagagaaggac agttggttcctgtcaagatcggcaaaatcggccaaaaacgaaacaataacccggtttttg cagttgtgtttgttccctagatgcactttcacgtcgatcgatgccgtgtattgcgctaag ttcgtccacgtgattcacatgctgaaaacgccgaatttttcgacgcttttgtgctacgac aggctcttttgcgacgtcacatattccattacttcgtgtaccgaaaatgaggcgatgcgt tatgggcgatttctgtacgcaatgctcgagactgtaatgcggtggcacaaatcgaaagag ttgtttgagaaagaatgtgccaattatccaggttttgttactaaatatcgtctgaataac caacatgccgacaatttggataatgtcggttatgagaattacaggcatgtttgtcataaa tggcactataaagtagcaaaggctatggtcacgtgcttggactcgaaagattacgtacaa atcaggaactcgttaattatcctaattaagatcattccatttttccccgtgttgcaaaag gtggggcaatttattgaaaaacggatcgaaaaagtgcgagatgaggagaagaacaatcga caggatttgttcacgttgtctagtagttacttggggttgttgaaacagaggattatgagc gggcatatggtgaaagagagcgatttccatattttggtggagaaagagaaggttgtgaga agtcatgaagctaaaagtgaggcaggttctagcaaacataacggcgaagttaaagaagag atgaaggacaaaagcgagaaaaaaatcaaagcggaggatcttaaagtcgtctcacgaaca tcgcaaggttcccaaagctctggcgattataacgcgtgggaacgccccgaaccaagggaa aaacacagaagggaggagaaacgtgacgattttgagaaagaacgcgaaagagagaaacgt agagagcgtaaagaggagaaattggcgaaacaggaagaacgacagtatcgagaggagcgc tattctgaaatcagtccgaaagatgaaatgcggtattcaagcgacagacaagtggaacga tactatgacgaaagaggcagtcactactatcgagaagtgcgagatgaacgcgaaatcggg ttgagtggtagcaataatgggtcaagtagtatgggaaggcatagtcaagagcccgagacc gatagagaagttaaaagaagaaaaatggatggttcttctttgaagagttcgaaacacgaa gagaggaaactacaacaactcgattacatgttagagaaaacggacaaaaaagaaaggtcg ggcaaagcgaaagagaagagggaaaagttgagcgacgaggaaaaagagttgaggaaagaa cggaagttgggaaggaaaagggatcggaccgaagaagcgctccaagttgaaatgaagagg cgaagagaagaagaaaaagcggcgaaactttcacaccaaaatggagaaatcatggaaccc gtccaccaaagagaaaaacatcatcgctcgagagacttgtcaccatatccacgagagagg tcgcacgatgaccgactcgaaatgagggaaaaacacagaagaagtgccgaaaataaaagg agatga

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