Tribolium castaneum (red flour beetle): 663520
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Entry
663520 CDS
T01046
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03020
RNA polymerase
tca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
663520
09124 Replication and repair
03420 Nucleotide excision repair
663520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
663520
03400 DNA repair and recombination proteins [BR:
tca03400
]
663520
Enzymes [BR:
tca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
663520
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
663520
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
663520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
663520
NCBI-ProteinID:
XP_974653
UniProt:
D6WZU5
LinkDB
All DBs
Position
LG9:complement(13724341..13728167)
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AA seq
1175 aa
AA seq
DB search
MYEQDEDQFDDEESEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPQIDLQAEAQHTSGELENPSRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKDGEDPIETQHQKTFIGKIPIMLRSTYCLLNGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKSEIRSCLEHSSRPTSTLWVNMM
ARGGQAIKKAAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNIALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLDLAIKTKLITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIANATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGTLLLKKRHIDMLKEREYNNYGWQVLVASG
VVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIIAPGIRVSGDDVVIGKTMTLPENDDELDGTTKRFTKRDASTFLRNS
ETGVVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMIFTCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDQYRIHVCNFCGLIAIANMRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaacaagacgaagaccaattcgacgatgaagagtctgaagaaatcagctccgag
ttgtggcaagaggcctgctggatcgtcatcaacgcctatttcgacgaaaaaggcctcgtc
cggcaacaactggacagtttcgacgagtttatccaaatgtcggtgcaacgaatcgtcgaa
gactcgccccaaatcgacctccaagccgaggcacagcacacaagcggcgagcttgaaaac
ccctctcggtatttactgaaattcgagcagatctacctatccaaaccgacccattgggag
aaagacggcgccccctcgcccatgatgcccaacgaggcccgcttgcgcaacctgacctac
tcggcccccttgtacgtcgatatcaccaagaccatagtcaaggacggcgaggaccccatt
gagacccagcaccagaaaaccttcatcgggaaaatcccgattatgctccgatccacgtac
tgtctcctcaacggtctaaccgaccgcgacttgaccgaactcaacgagtgcccccttgac
cccggcggctacttcatcatcaacggctcagagaaagtcctaatcgcccaggagaaaatg
gccacgaacaccgtctacgtcttctcgatgaaagacgggaaatacgccttcaaatccgaa
atccgctcctgtctcgagcacagctcgcgccccacgtccaccctctgggtcaacatgatg
gcacgtgggggccaggcgatcaaaaaggccgccatcgggcaacgaatcatcgcgatcttg
ccctacatcaagcaggagatccccatcatgatcgtgttccgggccttggggttcgtggcc
gatcgggacatcctcgagcacattatttacgacttcgaagaccccgagatgatggaaatg
gtgaaaccgtccctggacgaagcgttcgtgatccaggaacagaacatcgcactcaacttc
attgggaccaggggggcccggccgggcgtcaccaaagaaaagcgtatcaaatacgcgcga
gagatcctccagaaggagatgctgccccacgttggagtgtccgatttttgcgagacgaaa
aaagcctactttttggggtacatggtgcaccggttgctcctggcggctttggggcgccgc
gagctggacgatcgggatcactacggtaacaaacgactggacttggcggggcccctgctt
gcgtttttgttccgtgggttgtttaaaaacttgatgaaggaagtacggatgtatgcccag
aaatttattgatcggggcaaagactttaacctcgacttggccattaagactaagttgatt
acggacgggttgaggtattctctggcgactggtaactggggggaccagaagaaggcccac
caggccagagccggtgtctcgcaggtgttgaaccgtttgacttttgcctcgactttgtcg
cacttgagacgtgttaattcgcccattggacgtgacgggaagttggcgaagccccgacag
ttgcacaacacgctctgggggatgatttgtccggcggagacaccagaaggggcggctgtt
ggtctggtgaaaaatctggccctcatggcgtatatttcggtggggtcgcaaccctctcca
attttggagtttttggaggagtggtcgatggagaatttggaggagattgcgccgtctgcc
atagccaacgcgaccaagatttttgttaatggttgctgggtgggaattcacagggacccc
gaacagttgatggcgacgttacgcaagttgaggagacagatggatattattgtgtcggag
gtttccatgattcgggatattcgggaccgggagattcgcatttacacggatgctggacgg
atttgtcggccgttactaatcgtggaaaatgggactttattgttgaagaagcgccacatt
gatatgttgaaagagagggaatataataactacgggtggcaggttttggtggcttcaggg
gttgtcgaatatatcgatactttggaagaggagactgtgatgattgcgatgtctccggac
gatttgagacaggagaaggaatacgcgtattgtaccacttacacacattgtgagatccat
ccagctatgattttgggtgtttgtgccagtattatacccttcccggatcacaaccagagt
cccagaaacacatatcaaagtgctatgggcaagcaagccatgggtgtgtacatcaccaac
ttccatgtccgcatggacacccttgcccacgtcctgtattacccccacaaaccgttggtt
acaaccagatcaatggaatatctcagattcagggaattaccggctgggattaacagcatc
gtggccattgcgtgttacaccggttataaccaggaggattcggttattttgaacgcgtcg
gccgtcgaaaggggatttttccgatctgtgttttaccgctcgtacaaggacgccgaatcg
aaacgcatcggcgaccaagaggagcagttcgagaaaccgactcgccagacctgccaaggc
atgcgcaacgccctctacgacaaactggacgatgacggcatcatagcaccaggaatccgt
gtctctggcgacgacgtcgtcatcggcaaaacaatgacactgccggaaaacgacgacgag
ttggacggcaccaccaaacgtttcacaaaacgtgacgcctccacgttcctccggaacagc
gaaacgggggtggtggaccaggtcatgctcaccctcaactcggagggctacaaattctgc
aaaattagggtgcgttccgtgcgcatcccccaaattggggacaagttcgcgtcacggcac
ggacagaagggcacctgcgggatacagtaccgccaggaggacatgattttcacgtgcgag
ggcctaacccctgacattataatcaacccccatgccatcccctcgcgtatgaccatcggg
cacttgattgagtgcatccaaggcaaagtctcggcaaacaagggcgaaatcggcgacgct
accccgtttaatgacgccgtcaacgtgcagaaaatctcaactttgctacaagagtacggg
tatcagctccgaggcaacgaagtgatgtacaatggacacacaggccggaaaatcaacgcg
cagattttcttaggcccgacgtattatcagagactgaagcacatggtcgacgataagata
cattcgagggcgcgagggcccgtccagattttggtgcgacaacccatggaagggagggcc
cgcgatggggggctgcggtttggggaaatggaacgtgattgtcagatttcgcacggagcg
gcacagtttctacgcgagaggttgttcgaggtttcggatcagtatagaatacatgtttgt
aatttttgcgggttgattgccatcgctaatatgaggaataacacgttcgagtgcaagggg
tgcaaaaataagacgcagatttcgcaagtgaggctgccgtatgcggccaagttgctcttc
caggagctgatgtcgatgaatatcgcgccgcggttgatggttttgtaa
DBGET
integrated database retrieval system
