Tribolium castaneum (red flour beetle): 663739
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Entry
663739 CDS
T01046
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
663739 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
663739 (CNOT1)
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
663739 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
663739 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
PMBR
Motif
Other DBs
NCBI-GeneID:
663739
NCBI-ProteinID:
XP_008190963
UniProt:
D6WH28
LinkDB
All DBs
Position
LG3:6028849..6040468
Genome browser
AA seq
2374 aa
AA seq
DB search
MNLDSLSFTLSQISYLVASLTKKNYKQVVAELSKLVTLHGLEADRHLLQCLFSSVDFSES
TSKITAPSPQNQALLEQCSNLLNKPSLLTSVCYITDNPLSTNKAFKFGPQFFQQLSKCLR
LSAVQEVVFALALRHSSNQEVSSLAQAHLRLTVPTLIQSYIETEGSTRQHEGGLHETTPE
VLHLILSAVLKAPKDVGLTNNAHRAFLDTLQRDFPKDLVPVVLAPLVYPEHCELSPEMSS
EGPGLSGGMLETSLADLVAEIGFGFTSSVEECRNNLMKLGGRDITPATVARILTVMCRTH
SGLEDSLSLQSPGSFNKGNEGRTWNVEVFVQALKEVVPNFQWANTVAELDHPEFIIKDRQ
GLIILISALRHGLQTLGFHPETFPIDQFYKRWTNVEGQFSLVQHVLKNPDVFCFADYPAM
TVSVDVLKTPPEQDSKELANWRSLNLVELLLHMSECGLFTYVQELFKYPMHNCPDVLVLA
LLQIQGPVTLLRQELLSNLIPIFLLNHPNSAIILHHAWHTTNINIKSIIMHAMAEWYVRS
DCDQTRLSRILDVAQDLKALSMLLNAQNQQSYPFIIDLACLASRREYLKLEKWLSDKIRE
HGEPFVQACVKFLHRRCPQILGKSDDAMTKASSLPNETLTTIMICLQSCMNSVSPECQEA
IINVTTGCSILLKSRQQPALVRSRGVEGPFSVSAMSGQLYNHSAVDTIPGLTTNLASMTM
SGPTSSAFNLQGGLGPLVQSPGSPSRILGAGPSNSPFPMMPLQHQGPVGTSSSLVLGVNQ
IGNIGRMGPASNIDKSRIPEYNLFPEMSPNVSKDIEDEANSYFQRIYNHPPHPTLSIDEV
LDMLKRFQDSHNKREREVFNCMLRNLFEEYKFFPQYPEKELFITAQLFGGIIERSIVTSY
VALGLALRFVLEALKKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFSEFPSHL
QEYVEYGLQSVEPPNKPQGSVLPASMASMLAPPSTPVSQVYKPNSTISSSAPSKASTTTT
STLGSRPSIANATNIDTLLVATEKDEKVIAPPEALQDKIAFIFNNLSQLNLKPKCDELRE
LVLEEYWPWLSQYLVMKRASIELNFHGLYSNFLDTLNNNEVYRMVTKETYRNIKVLLRSD
KGIENFSDRSLLKNLGHWLGILTLARNKPILQIDLDLKSLLVEAYNKGQQELLYVVPFVA
KVIESCAKSKVFKPQNPWTMAIMNVLAELHQEQDLKLTLKFEIEVLCKNLDIDITQLKPT
MYLKDPERIHKIEYQLSQPSKKENVLIPSTQGNIPQGAINEPELVNMIPGQAANSPVTHN
NSTTPTSALSAPPEPRFSYGDIQIAGMTSFQTHTVVSPSILLFQNQPQLKPLVRSSIEHA
VQEWIAPVVDRSIKIALQTCEQIIRKDFALDPDEGRMRLAAHFMVRNLTAGMAMITCRDQ
LLSAINTHLKQALLANIGTPTLQQKEMIEQAASIIANDNMELACAFVQKTAVEKAIPEID
KRLMSEYDLRKMARQEGRRYCDAIALTYQAERMPEQIRLKVGGISNSQMAVYEEFARNIP
GFLPNERDSSILMQKQNLAPIETQIHPTTPFPLPQAAVLNDDLTITFEKLCLEIEQFVQA
TSGQPQYSHMSSNLLLIRECLLHTSRNRDPTPPQAMVQKCVESLQDSLGSTLSEADPVVM
RFKEIIVRVLKSFQDPRVFGQQWTNKLVTRFLTECREDYRYNIDAVDTLIKSGLVHVPQY
DLALAQCMENGVNYMGVNFAMQLVQLYLIDDRNNQFVTDNDLCNTIEMLAKIQTHMRQPP
EGLGNIIEILRQNPETPFFGDRAPVGPTLHIHNGILQVRGPYHDDPPGFVEKTDFLLREW
ISIYNQPQGRDSTKAFGVFVHQMNMHGILKTDELITRFFRLSTQLCVEAVYRIISDKTNA
QLPTVRAKCYNTLDAFVRLVALLVKHSGDANNTTTKIHLLNKVLGIVAGCLLQDHDTRTI
EFNQLPYQRIFTMLFLELNSPEPVLEAINFHVLSAYCHTLHILRPTKAAGFCYAWLELVS
HRIFMGRMLAGTPQQKCWPLYAQLLIDLFKYLSPFLRNAELAKPVTMLYKGTLRVLLVLL
HDFPEFLCDYHYNFCDEIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLPEIAFGPR
ILANIPINITPAQFRKDLDSYLKARAPVTFLSELRSNLQISNEPGVRYNIPLMNALVLHV
GMQAIAYIRGKGHPPNMTTIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTH
YFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWSHEF
VHCAPEIEKLFESVARSCMVQKTAVQAQENEIQE
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagactcgttgtcttttaccttgtcacaaataagttatttagttgcatcatta
accaaaaagaactacaagcaagtcgttgccgaactctcaaagttggtaactttgcatggt
ctggaggcggaccgtcacttgctccaatgtctattttcatcagtggacttttctgaatct
acaagcaaaataaccgctccatctccccaaaatcaagcattgttagagcagtgttcgaac
ttgttgaacaaaccctcgctgctgacgtctgtttgctacatcacagacaatccattgagc
accaacaaggctttcaaattcggaccccagttcttccagcagttgagcaagtgccttcgc
ctctcagctgtccaggaagtcgttttcgctctcgcccttcgccactcttcaaaccaggaa
gtttcgtctttagcccaggcacatttacggttaacggttccgactctcatccagtcgtat
atcgagactgaaggcagcacccgccagcacgaagggggcctccacgagaccacccccgag
gtcctccacttgatcctctccgctgttctgaaagcccccaaagacgttgggctcaccaac
aacgcgcaccgggcgtttctcgacactctccagcgcgacttccccaaagacctcgttccc
gtagtgttagcaccgttagtttaccccgaacattgtgaattgtcgccggaaatgtcatcc
gaaggccccggtttatccgggggcatgttagagacttcgctggccgatctggtggctgag
atcggtttcggttttacttcgtcggtggaagaatgtcggaacaacttgatgaagcttggg
ggacgcgacatcacccctgcaacagtcgctcggatccttaccgttatgtgccgaacacac
agtggccttgaagattcactcagtctacaatcgccaggcagttttaataagggcaatgag
gggcgcacttggaacgtggaggttttcgtccaggcgttgaaagaggtcgtgccgaacttt
caatgggccaacactgtggccgagttggaccatcccgaatttattattaaagatagacaa
ggactcattattctaataagtgcacttcgacatggcctccagacgctgggattccacccg
gaaacttttccaattgaccaattttataagagatggacgaacgtcgaggggcagttcagt
ctcgttcaacatgttctcaaaaatccagatgtgttctgttttgctgactatcccgcgatg
accgtcagtgttgacgttctcaaaacaccaccggaacaagacagcaaggaactggccaat
tggagatcgttaaatctggtcgagttgctcctgcacatgtctgaatgtggcttgttcact
tacgttcaagaactgttcaaatatccaatgcacaactgtcctgatgtcttagtcctcgca
ttgttacaaatacaagggcctgtaacgctcctcagacaagaattactctccaacttgatc
ccaatctttctcctgaatcacccaaactctgccataatactacaccatgcctggcacacc
accaacatcaatatcaaatccataataatgcatgccatggccgaatggtatgtgcgaagc
gactgcgatcaaacgagactgtcccgaattctggacgttgcccaagacctgaaagccctc
tcaatgctcctaaacgcccaaaaccaacaatcttatccgttcatcatcgacttggcttgt
cttgcatccagacgtgagtacctcaagctggaaaagtggctctcggataaaatcagagaa
cacggcgagccttttgtccaagcttgcgtcaagtttttgcaccgccgttgcccgcaaatc
ctgggcaaaagtgacgacgctatgaccaaagcttcgtccctacccaacgaaactttgacc
acgattatgatttgtttgcaatcttgcatgaacagcgtcagtcccgagtgccaagaggcg
ataatcaacgtcaccaccggttgcagtattttactgaaatcgcgtcaacagccggctctt
gttaggtccaggggcgttgaaggcccgttcagtgtttcggcaatgtcgggacagctttac
aaccactctgctgtcgatactattcccggtttgaccacgaatttggccagcatgacaatg
tcggggcccactagttcggcgtttaatttgcaagggggactcgggccgctagtgcagtct
cccgggtctccttcgcggattttgggtgctggtccttcaaacagtccgtttccgatgatg
ccgttgcaacatcagggaccagtagggaccagttcgtcgctggttttgggagttaatcaa
atcgggaatattggaaggatgggcccggcttcgaatattgataaaagcaggattcctgaa
tataacttgttcccggaaatgtcgcccaacgtatcgaaggatattgaagacgaagctaat
agctattttcaaaggatttacaatcatccgcctcatcctactttgtccattgatgaggtg
ttggatatgttgaagaggttccaggattcgcacaacaaacgggagagagaagttttcaac
tgcatgctgcgaaacctgttcgaagaatacaaattttttccgcaatacccggagaaggaa
ctgtttatcacagcccaactctttggtggcataatcgaaaggagcatcgtaacatcttac
gtcgcattggggttggctctgcgtttcgtcttagaagccctcaaaaaaccagagggatcc
aaaatgtattatttcggcatagcagcgctggatagattcaagagccgattgaaagactac
cacaaatattgcgagcacgtacgagccatacctcatttttccgaatttccgtcacattta
caagaatatgtcgagtacggtttgcaaagtgttgaaccaccaaataagccacaaggttca
gttttacccgccagtatggcttcgatgcttgcgccaccaagcactccagtttcgcaagtg
tataaaccgaattcgacgataagttcgagtgccccgagcaaggcaagtactacgaccact
agtactttggggagtagaccatcgatagccaatgcaacgaatattgacacacttctggtc
gccacagaaaaagatgagaaagtaattgcgccaccggaagctctccaggataaaattgcc
ttcatttttaataacttgagtcaactgaaccttaaaccgaagtgtgacgagttgcgtgag
ctagttttggaggaatactggccttggctatcgcaatatttggtaatgaagagggcgtca
atcgagttgaattttcacgggctgtattctaatttcttggacactttgaataacaacgaa
gtttacagaatggtcactaaagaaacgtacagaaacatcaaagttctgctacgatcggat
aaaggaatcgagaatttctctgatagatcattattgaagaatttgggacactggttgggc
attttgactttggcccgcaacaaaccaattcttcaaatcgatttagacctaaaatcactg
cttgtagaagcgtacaataaaggccaacaggaattgctgtacgtggtgccattcgtagcg
aaagtgatagaatcgtgcgctaaaagcaaagtcttcaagccacaaaacccctggaccatg
gccatcatgaacgtcctcgccgaactccaccaagagcaggacttgaaactcactctgaaa
ttcgaaatcgaagtgttgtgcaaaaacctcgatattgacataactcaactgaaaccgacc
atgtatttgaaagaccctgaacgcatccacaagatcgagtatcaattatctcaaccatct
aagaaagaaaacgttttaattccgtcaacacaaggcaacatccctcagggcgctataaac
gaaccggagttggtgaacatgattccgggacaggcggctaattctccagtcacacacaat
aacagtaccactccaacttcggcattgtctgcacctccggagccccgtttcagctatggg
gacatccaaattgccggaatgacatcttttcagacacacaccgtcgtcagtccttctatc
ctgctgttccaaaaccagccacagttgaaacctctagttcggtcgtcaattgaacatgct
gtgcaggagtggatcgcgcctgttgttgaccgctccattaaaatcgctttgcaaacgtgc
gaacaaatcatcagaaaggattttgctttggatcctgacgagggacgaatgagactagcg
gcgcactttatggtcaggaatctaaccgccggtatggcaatgataacgtgccgagaccaa
ttgttgtctgccataaatactcacctgaaacaggccctcttggcgaatattggtactcct
actttgcaacaaaaggagatgattgaacaagcggccagtattattgccaatgacaatatg
gagttggcgtgtgcctttgttcaaaaaacggcggtggagaaggctattcccgaaattgac
aagcggttgatgagcgagtacgatcttaggaagatggcgagacaagaaggacggcgctat
tgtgacgccattgcgctgacttaccaggccgagcgaatgcccgagcagattcgcctaaaa
gtgggcggaatttccaacagccaaatggctgtgtacgaagaattcgcccgaaatattcca
ggatttttaccgaacgaacgcgattcgagcattttgatgcaaaaacaaaacttggcaccg
attgaaacccagatacatccaaccacaccatttcccctaccacaagcagcggtgctcaac
gatgacttgaccataactttcgagaaattgtgtctcgaaatcgaacagtttgtccaagcc
acatccggacaaccacaatattcgcacatgagttctaatttgcttttgatcagagaatgt
cttctacatacttcgagaaatagggatccgactccgccacaagccatggtacaaaaatgc
gtggagagtctgcaagattcccttggttcgacattgagcgaagccgaccctgttgttatg
cgtttcaaggagattatagttagagttttgaaatcattccaagatccgcgtgttttcgga
caacagtggactaacaaactggttacgagatttttgactgaatgtcgtgaagattatcgt
tacaatatcgacgctgtcgatacgttgatcaagtctggtcttgttcatgttcctcagtat
gatttggcactggcccagtgcatggaaaacggcgtgaactatatgggagtcaactttgcc
atgcaattggtccagttgtatctgattgacgatcgcaataaccagtttgtgaccgataat
gacctttgtaatacgatcgaaatgttggccaagatacaaacccacatgagacagccacct
gaaggtttgggcaatatcatcgagatactgagacaaaatcctgaaacaccgttctttgga
gaccgcgcgcccgttggacctactcttcacattcacaatggaattcttcaggtgcgcggg
ccgtatcacgatgatcctccgggatttgtcgagaaaaccgacttcctcttaagggagtgg
ataagtatctacaaccagcctcaaggccgcgactcaacgaaagcgttcggcgtattcgtg
catcaaatgaacatgcatgggattctaaaaaccgacgaattgattacaagatttttcaga
ttgtccacacagttgtgcgtggaagcggtgtacagaataatttcagataagaccaacgca
cagttaccaacagtcagagcgaaatgttacaacacactggacgcgtttgttcgtctggtg
gccctcttggtgaaacattcaggtgatgccaataacaccactacaaaaatacatcttttg
aataaagttttggggatcgtcgccggctgtttgctccaagatcacgacacaagaaccatc
gagttcaatcagctgccctaccagaggatcttcaccatgttgttcctcgagttgaactcc
cccgaaccggtcttagaagccatcaatttccacgtgttgagcgcttattgccacactctc
cacatcttgcgtccgacgaaagccgccggtttttgctacgcctggttggagttggtgtcc
catcgaatcttcatggggcgcatgctagcggggactccgcaacaaaagtgttggcctttg
tacgcgcaacttctcattgatcttttcaagtatttgtcgccgtttttgaggaacgccgag
ttggccaaacctgtcaccatgctctacaaaggcaccttgcgcgtgctcttggtcctcctg
catgatttccccgagttcctatgcgactaccattacaatttctgcgatgagattccacca
aattgtattcaaatgagaaacttgattttgtcggcctttccgcgcaacatgaggctccct
gaccccttcacccccaacttgaaggtcgatatgttgccagagattgccttcggtcccaga
atcctagcaaatattccgatcaacatcactccagctcagttcagaaaggatctcgattcg
tatctgaaagctagggctccggtgaccttcctatcggaattgcggagcaatcttcagatt
tccaacgaacctggcgtgcgttacaacatccccttgatgaacgcgctggttctgcatgtg
ggcatgcaagctatcgcctatatcagaggcaagggacaccccccgaacatgaccaccatc
gcacacagtgcccatatggacatcttccagaacctcgccgtggatttggataccgaaggg
agatacttgttcctgaatgccatagcgaatcagctgcgttatcccaacagccacacgcac
tacttctcgtgcactttgttgtacttgttcgccgaagccaacactgaagccattcaagag
caaataacgcgagttcttctggagaggttgatcgtcaacagaccacatccgtgggggctg
ctcatcaccttcatcgagttgatcaaaaatcccacctacaagttttggagccacgagttc
gtgcactgcgctcccgaaattgaaaagttatttgagtcggttgccagatcatgcatggtg
cagaaaacagcagtgcaagcccaagaaaatgaaatccaagagtga
DBGET
integrated database retrieval system
