Tribolium castaneum (red flour beetle): 663766
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Entry
663766 CDS
T01046
Symbol
Tcas_8916
Name
(RefSeq) cys-loop ligand-gated ion channel subunit
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca04080
Neuroactive ligand-receptor interaction
tca04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
663766 (Tcas_8916)
04082 Neuroactive ligand signaling
663766 (Tcas_8916)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tca04040
]
663766 (Tcas_8916)
Ion channels [BR:
tca04040
]
Ligand-gated channels
GABA-A
663766 (Tcas_8916)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
663766
NCBI-ProteinID:
NP_001103425
UniProt:
A8DMV0
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Position
LG4:8674218..8681880
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AA seq
549 aa
AA seq
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MFGLRAGFCLLQVTLVCSEALRHLKHEGASLENDLLGQNMSLKSVVVGFSLNSTEEKIIR
RSLSDVVSRNITMVLENLLKNYESSQLPTHGKDQPTIVQTNILIRSMGPVSELDMEYSMD
CYFRQYWRDQRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQ
DGDILYSMRLTIKAKCPMELRTFPMDRQSCPLILGSYAYTSKDLLYRWQNEASVNFVPGM
TLSQFDLISFPYRNFTLKRREGDFSVLQVSFNLQRHTGYFLIQVYVPCILIVVLSWVSFW
IHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATLLEFAG
VHYFTKVGSGEIPVDEDDWEDCNEPEEEMIGMSAAELENSLSPASRAGRRKSSLICPIYN
NTALHYSSKRTSLTSNTQVPPPVRLTVERTTQTEVRLPKWKQFLYCLKGDDKFRRQRQRE
AAAGASNGNERGHHCHAPRHVNSVSLIDRAARILFPASFGFFNLIYWMIYFTYQDDFKWA
DTKLSSLSH
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacttcgggccggtttttgtctcctgcaagtcacacttgtttgttcggaagct
ttgaggcacctgaaacacgaaggagctagtttggaaaacgacttattgggacaaaatatg
tcgctgaaaagcgtggttgttggattttcgcttaatagtacggaggagaaaattattcgg
aggtctctcagcgatgtggttagcaggaatattacgatggttttggagaacctgctgaaa
aattatgaaagttcgcagctgccgacgcatgggaaagaccagccgactattgtccagacg
aacatcttgatccgcagcatgggtccagtgtccgaactggacatggaatattcaatggac
tgttatttcagacagtactggcgagaccagcgcttgtcatttttaggtccaataaaatct
ctctcactatcaataaaaatgctagaacgcatctggagacccgatacttacttttacaac
ggcaagcactcatatgtccatacaataaccgttcccaacaaactcttaagaatcagtcaa
gacggcgatattttgtactcgatgaggctaacgatcaaagccaagtgtccgatggagctt
cggactttccccatggacaggcaatcgtgccctttaattttgggcagttacgcttacacc
tccaaggatttgctgtaccgatggcaaaacgaggcgagcgtcaatttcgtcccggggatg
acactctcacaatttgatttaattagtttcccttacaggaattttacgctcaagaggcgg
gaaggcgacttctccgtgctccaagtctcgtttaaccttcagcggcacactggttacttc
ctgatccaggtctatgttccttgcatccttatcgtggtgttatcctgggtgtcgttctgg
atccaccgggaagcaaccagcgaccgtgtgggtcttggaatcaccactgttttaaccctc
tcaactatcagtctggactctcgaaccgaccttcccaaagtccgctatgccacagctttg
gattggttcctcctcatgagttttttctactgcatcgcgactttgctagaattcgcagga
gttcactactttactaaagtcgggagtggggaaattccggttgatgaggacgattgggaa
gattgcaatgagccagaagaggaaatgattgggatgtctgcagctgagctggagaattcg
ctcagtcctgccagccgtgcaggacggaggaaaagctcgttgatttgtcctatttacaac
aatacggctctccattacagtagtaagaggacgtctttgacgtcgaacacgcaagtccca
ccaccggtgagactgacagtggaaaggacaacccaaactgaggtgaggctgccgaagtgg
aagcagtttttgtactgtttgaaaggagacgacaagtttcggaggcaaaggcagagagaa
gcagctgcaggtgcctcgaatggtaatgaacgaggacatcactgccatgctccaagacat
gtcaacagcgtttctctgattgatcgggctgcgaggatcctttttccagcatccttcggg
ttctttaatttaatttattggatgatttactttacctatcaggatgattttaaatgggcg
gatacgaagctgagctcgcttagtcactga
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