Tribolium castaneum (red flour beetle): 663806
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Entry
663806 CDS
T01046
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03430
Mismatch repair
tca03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
663806
03460 Fanconi anemia pathway
663806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tca03400
]
663806
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
663806
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
663806
NCBI-ProteinID:
XP_008190970
UniProt:
D6WH35
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All DBs
Position
LG3:complement(6054022..6060052)
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AA seq
853 aa
AA seq
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MNCEDQVIQPINRDTVHRICSGQVVLSLAIAVKELVENAIDAGATIIDIQLKEYGSEIIE
VSDNGSGVLKENFQALTLKHYTSKIKQFDDLENLSTLGFRGEALSSLCALSDLSIVTKHT
SAENATKITYDRSGKIISETVSARESGTTVTLENLFSTLPVRRREFTKNLKREFNKMCQL
LYAYCLVSKGIKFSCTNTTSKGSKNTVVATEGLNMVKDNITNVFGPKQLPSLIEVEMVRP
DETILAEYGIKLTEGDPLPFTFEFFISSVMHGSGRSTNDRQFFYINSRPCDPSKVARLVN
EIYKQYNNNQYPFVYLNITSKSSLVDVNVTPDKRQVFLEKEKVLLSTIKASLIEAFKMFP
STYKMQNLDLTQNTTIKDFFKDSDCSPRGLKRSVTESELKKGSTLERFKKRSKTENDKDL
LASPNHSSSLKEKRKVDNNSQLDTFIKIASEIIARDKREEKSFNALCEEEDIEETKTVCT
NTFIKTTSQIIAKDDCGTNKSEEKSLNTLCEEDIIEEIKTVCSSTTKEAENIVTIPKTIN
ECEDKEEIEKTNEIKITKSPSQLDNRIEEKKEKKDSGEEPTKNESKFEKSVAEDKLLQDA
PLKSRESRKTVNLDVSLEDIRKSIEQKVTKDNDIKVRFRSKINPDSNKSAEEELRKHISK
EDFANMDVIGQFNLGFIITKLKNDLFIIDQHATDEKYNFEQLQASTVMENQVLVNPKPLQ
LTAGNESLLIENEDIFNKNGFTFKIDESAPCTQKVSLTSIPLSKSMVFGKQDIEEMLFML
QDSNHTMCRPSRIRAMFATRACRKSVMIGKPLSKSDMRRLVNHMGEIEQPWNCPHGRPTM
RHLINLDLIQEET
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtgaggaccaagtgatacaaccaataaatcgcgatacagttcaccgaatatgt
tctggtcaagtagtcttaagtttagcaatcgctgtgaaagaactggtcgagaacgccatt
gacgcgggggccacaatcatcgacattcagcttaaagaatacggctctgaaatcattgaa
gtttcagacaacgggagtggagttctaaaagagaactttcaagctctcactctgaaacac
tacacttcaaagataaaacagtttgatgatctggaaaacctctcaactttggggtttagg
ggcgaggcccttagcagtttatgcgctttgtctgatcttagcattgtaacaaaacacaca
agtgcggaaaacgcgactaaaattacctacgataggagtggcaaaattatcagtgagacg
gtaagtgcgcgggaaagtggcacaacagtcactttggaaaatctgttttcaacactgcca
gtgaggcgccgagaattcactaaaaacttgaaacgagaatttaataaaatgtgccagcta
ctatatgcttactgtttggtatcaaaagggattaagttttcgtgtacaaatactacgagt
aaaggtagcaagaacacggtagtggccacagagggcttaaacatggtcaaagacaacata
actaacgtttttgggcctaaacaactcccttctttaattgaggttgaaatggttagacct
gacgagacgatattggctgaatatggaatcaaactaactgaaggagatcccttgcctttt
acttttgagttctttatatcaagtgtcatgcatggtagtggacgcagtaccaatgataga
cagtttttttacataaactcacggccctgtgatccctccaaagtcgcaagattagtaaat
gaaatttataaacaatacaataacaatcagtatccgttcgtttacctaaatatcacaagc
aagtcgtctttagttgatgtaaatgtaactccagataagcgacaagtatttttagaaaaa
gaaaaagttttgttaagcacaattaaagcctctttgattgaagcttttaaaatgtttcct
tccacgtataaaatgcaaaatttggaccttacacaaaacacgacaatcaaagattttttt
aaagacagtgattgttcaccgagaggtttaaaaagaagtgtcactgagagtgaacttaaa
aaaggtagcactttggagagattcaaaaaaaggtctaaaaccgaaaacgataaagacttg
ttggcaagtcccaatcatagttctagcttgaaagaaaaaagaaaagttgataataattcc
cagctggatacttttattaaaatagcttcagaaattattgctagagataaacgagaagag
aaatcatttaatgccctttgtgaagaagaggatattgaagaaacaaagacagtatgtacc
aatacttttattaaaacaacttcacaaattattgctaaagatgattgtggtacaaataaa
tcagaggagaaatcccttaataccctttgtgaagaagatattattgaagaaataaagaca
gtatgtagcagtactaccaaggaagcggaaaatatcgtcacaattcctaaaaccatcaat
gaatgtgaagataaagaagaaatcgaaaaaacaaatgaaattaaaattacgaaatcacct
tcacagctagataatagaatagaagaaaagaaagaaaagaaagattctggagaagagcca
acaaaaaacgaatcaaagttcgaaaaaagtgtagccgaggataaattattacaagatgcg
ccactgaaaagtcgtgagtctcgaaaaacagtaaatttagatgtttccttagaagacatt
agaaaatcaatagaacaaaaagtcacaaaagacaatgatatcaaagtgcgttttcgttcg
aaaatcaatccagactcaaataaatctgcagaagaagagttgcgaaaacacatctctaag
gaagactttgctaacatggacgtaatcggtcagtttaatttaggttttattatcactaaa
ttaaaaaacgatttatttatcattgaccaacacgcaaccgacgaaaaatataatttcgaa
caactgcaagctagtacagtcatggaaaaccaagtccttgtcaatccaaagcctctccag
ttaacggcaggaaacgaaagtctgctcatcgaaaatgaggacattttcaataaaaacggc
ttcacgttcaaaatcgacgagtcggccccgtgtactcaaaaagtgtctctaacttcaata
ccactaagcaagagtatggtatttggtaagcaggacattgaggagatgctctttatgtta
caagattcgaatcacacaatgtgtaggccatctagaattcgggcaatgtttgcaactagg
gcttgtcgcaagtccgtcatgattggaaaacctttatcaaagagcgatatgaggaggcta
gttaaccatatgggcgaaatagaacaaccttggaattgtccacacggacgaccaacaatg
cgtcatttaattaatttagacttgatacaagaagaaacgtag
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