Tribolium castaneum (red flour beetle): 663996
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Entry
663996 CDS
T01046
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
663996
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tca01009
]
663996
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tca04131
]
663996
03029 Mitochondrial biogenesis [BR:
tca03029
]
663996
Protein phosphatases and associated proteins [BR:
tca01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
663996
Membrane trafficking [BR:
tca04131
]
Autophagy
Autophagosome formation proteins
ULK complex
663996
Mitochondrial biogenesis [BR:
tca03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
663996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
Rab11-FIP3
TBK1_ULD
ubiquitin
ZMYND8_CC
Motif
Other DBs
NCBI-GeneID:
663996
NCBI-ProteinID:
XP_008194411
LinkDB
All DBs
Position
LG5:complement(14203019..14215291)
Genome browser
AA seq
1231 aa
AA seq
DB search
MLFVFQVDTGRMMTFDMSLALESVQNLKSHVELAFKIPVDKQVLLISGGEHLRPDDRVCS
YPAGTDTNPIFLFSKAVIESDQPPAASVDYGSEQDLSSKVRESSELPATLSTVQKRTQLA
RLFCELSQSQMTTCEKLVHEQHLQQQGWSAVVANLEDLYSDLKHRWKLYQDAFNEYIAKR
DSYLEFLNHFKDDLLVLQKIPVLPALIESQKLLVPEQDDFSEDKQSGSVRGEMTLHEWIS
QRDDFMDCLFEICSKGLIQTDEKEFLALQEEIETKLAMTDDVTMKEIKGLGDRLFGLEKL
MVDAKRYVNEQMRLAESFQRNQSRASQVKEASILPALCATHLQQLDVLLENHNRLRDITR
RCILAKDELSSNLYHRLKWIVFMEDNLSEFDNKLVFHFQNLLSLQRQLEILQQVHTAPTI
YLSSIVEVVRRRKVSQAFLLWASDVACHLLTIYNEEIARRKDFQAQIEGHFLSSLFPGME
DFPPSFATQAPSIFDSSLPKLTEEDVENLRRALPDLAECLQIPDTSIIENYFMLKDSKDD
LDKTTKTVEDKLIEVVAEVGLASNLDQTMLKAIEGEPQQTTPHGLPHLKDLDKGCESETD
TEEFEKVGQSPFDLHFDKGIPSPRPGTQDASTLTEDNLQISRSEYEKLHSFLIRLSHLSR
LACTNLKSELIETKNHILREKVMVEEACGNLKIQMNNIILDKEKQEREIVQRLTVDHELE
ISDFRKIAQSKNEEIKGLRDENARLSSELRKVSQENLELKEGLEAMSCKSSKEMDDMKKR
MDEVLAEKERSTKEEIERLKSEYKSEMENIRARFKLMTMERSPSENSLEKIERGDYPSIT
NHEALLLQMTENFESEKEVAVSDAVSKESQRWQKILDDRIKQMECDFEQEKAFLIQNIQS
RIQQDQEKQINQLREQINNLNLECIKYKDTIQQLAEYREESDCNELMRRIDSLEREKTAL
KNELKRIKVAEPPPAMAASVAVCEGAAATADAATSPVKTRKRSETSSPKAGKLNIDSCKA
GDLVLVVWDIQHQNFKILQESSSLYFLNADCLESLGLKVVDGQPNKLYCYAEVVEKEYCH
ARKDENYSLLFQPVNRFRVPQGTKFFRVKVKPPPSGKEMPPAQFQAPTQTTHMSQSQTTV
SQVVDIIATAGPSHSLPSSPSKISWEKSGSQEAPIPEEKGEDSAVGRSEDSGGKNEEDIE
KGTELTENFHIDNHSIDRIEENCCLLLSPQK
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgtattccaagtggacactggccgtatgatgactttcgatatgagcctcgct
ctagaaagcgtgcaaaatttaaaatcacacgtggagttagcgtttaaaattcccgtcgac
aaacaagtcttgctgatcagcggaggagagcatttgcgtcctgatgacagggtttgctct
tatcctgctggaaccgacacgaatccgatttttctcttcagcaaggctgtgatcgagtcc
gatcaaccaccggcagctagtgtcgattatggatcagagcaggatctttccagtaaagta
agagagtcgagtgaattgccggcgactttgtccaccgtccagaaacggacgcaactggct
cgacttttctgcgaactgagtcagagtcagatgacgacgtgcgaaaagttggtccacgag
caacatttacaacaacaagggtggtcggctgttgttgccaatttggaggatttgtactcg
gatttgaaacatcgatggaaactctaccaggacgcttttaacgaatatattgcaaagcgc
gactcgtatttagaatttttaaaccatttcaaagatgatctccttgtgttacaaaaaatt
cctgtgttacctgcccttatagaatcacaaaagttactagtacctgagcaagatgatttc
tctgaggataagcaatcggggagtgtcagaggggaaatgacgctccatgagtggatatct
cagagggatgattttatggattgtttgtttgaaatttgttcgaaaggactgatacagacg
gatgaaaaggagtttctcgccttacaagaggagatcgagacgaagttagcaatgactgac
gatgtcactatgaaagaaattaaaggtttgggtgaccgacttttcgggttagaaaaacta
atggtggacgctaaacgttacgtcaatgagcaaatgagactggccgagagttttcagagg
aaccagagtagggcgagccaggtcaaggaggcgtcgatattgccggccctttgtgcaact
caccttcaacaactggacgttttgctggaaaaccacaaccgtttgcgtgacataacgcgc
cgttgtatcctcgctaaagacgagcttagttctaatttgtaccacagactcaaatggatt
gtgttcatggaagataatttatccgaattcgacaataaattagtgtttcattttcaaaat
ttgttaagtttgcaacgacagctggaaattttgcaacaagttcatacggcaccaacgatt
tacctctcgtcgattgtcgaagttgtgagaagacgtaaagtctcgcaggcctttctactg
tgggcttctgacgtcgcttgccatttgttaacaatttacaatgaagaaattgcaaggcgg
aaagattttcaagctcaaatcgaagggcattttcttagtagtttatttccgggaatggag
gattttccacccagttttgcgacacaagcaccgagcatttttgattcaagtttaccgaaa
ctaacggaagaagatgtggaaaatttgaggcgcgctttgcccgatttagccgagtgtctt
caaataccggacacttcaattatcgagaattattttatgctgaaagactcgaaagacgat
ttggataaaaccacgaaaactgtggaagataaattgattgaagttgttgccgaagtgggg
ttagctagtaatttagaccagacgatgttgaaggctattgaaggcgaaccgcaacaaacc
acaccacatggacttccgcacttgaaagatctggacaagggttgcgagtcggagacggac
actgaagagttcgaaaaggtgggccagagtccgttcgatctccacttcgacaagggaatt
ccatccccacgtccgggcactcaagacgcctccactttgaccgaggataacttgcaaatt
tcgcgctccgaatacgaaaaactccactcttttcttattcgactgtctcacttgagccga
ctggcttgtactaacttgaaatccgagttaatcgaaaccaaaaaccacatacttcgcgag
aaagtcatggttgaggaggcttgtggcaacctcaaaatccagatgaataacataattctc
gacaaagagaagcaagaacgcgaaatagttcaacggttgaccgtcgatcacgagttggaa
attagcgattttcgcaaaattgcgcagtcgaaaaacgaggaaatcaagggtttgagggac
gaaaatgcccgtttgagtagcgaactgcggaaagtttctcaggagaatttggaattgaag
gagggattggaggcgatgtcgtgcaagagttcgaaagaaatggacgatatgaagaagaga
atggatgaggttttggctgagaaggaacgtagcacgaaagaagagatcgagcggcttaaa
agcgagtataagagcgagatggagaacattagggcgcgttttaagttaatgacgatggag
agaagtccgtctgagaatagtttagagaagatagaacgcggggattaccccagtattacc
aatcacgaggcgcttttgcttcaaatgacggagaatttcgaatcggagaaagaagtggct
gtgagtgatgccgtcagtaaggagagtcaacgatggcagaaaatattagacgataggatt
aagcaaatggaatgtgattttgagcaggagaaggcgtttctcatccaaaatatacaaagt
agaattcaacaagaccaagaaaaacaaatcaatcaattacgggaacagattaataattta
aacttggagtgtattaaatataaggatacgatacagcaactggccgaatatcgcgaagag
agtgattgtaacgagctaatgcgccggatcgatagcttggaaagggagaaaacggctctt
aaaaacgaattaaagagaattaaagttgcggagccgcctccagccatggctgcttcagtt
gctgtgtgtgaaggtgctgcagctaccgcagatgctgctactagtccagttaaaacaaga
aaacgtagcgaaacttcttcacctaaagcgggaaaattaaacatagattcgtgtaaagct
ggcgatttagtattggtagtttgggatatacaacaccaaaattttaaaatattgcaagaa
agtagttcgttatattttctcaatgccgattgtcttgaatctctgggcttgaaagtggtc
gatggacaacctaacaaactttattgttacgctgaagttgtcgaaaaggagtactgccat
gccagaaaggacgaaaactatagtctactttttcagcctgttaaccggtttagggtacct
caaggtacgaaatttttccgtgtgaaggtgaaaccgcctccctctggtaaagaaatgcct
cccgcacagtttcaagctccgactcaaacgactcacatgtcgcagagtcaaacaactgtt
tcgcaagtggttgatataattgcgacggcaggtccttcgcattctttaccgtcaagtcct
tcgaaaatcagttgggagaagtcggggtcgcaggaggcgccgattcctgaagagaagggt
gaagattcagcggttggaaggagtgaggatagtggagggaagaacgaagaggatatagag
aaaggaaccgaattaacggagaatttccatattgataatcacagtattgatcggattgaa
gaaaattgctgcttactgctctccccccaaaagtag
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integrated database retrieval system
