KEGG   Tribolium castaneum (red flour beetle): 664096
Entry
664096            CDS       T01046                                 
Symbol
Rae1
Name
(RefSeq) RAE1 RNA export 1 homolog
  KO
K14298  mRNA export factor
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    664096 (Rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    664096 (Rae1)
   03036 Chromosome and associated proteins [BR:tca03036]
    664096 (Rae1)
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     664096 (Rae1)
Chromosome and associated proteins [BR:tca03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    664096 (Rae1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_HPS5
Other DBs
NCBI-GeneID: 664096
NCBI-ProteinID: XP_975206
UniProt: D6WQQ3
LinkDB
Position
LG7:complement(11253983..11255343)
AA seq 359 aa
MFNQSSIGGFGGTPTPSSANPMKDFEVTQPPDDSISSLAFSPATLPQNFLIAASWDNNVR
CWEIEQTGKSVPKSMQACGGPVLDVCWSDDGTKVFMAGCDKQAKAWDLGSNQVIQVAQHD
APIKTCHWIKASNYSCLMTGSWDKTLKFWDTRTPNPMMSINLPERCYCADVDYPMAVVGT
AGRQIIVYQLDGKPQQYKVLDSPLKYQHRCVAIFRDKKKSPTGYALGSVEGRVAIQYVNP
ANPKDNFTFKCHRSNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLK
SSDLMEQPITRCAFNSNGQIFAYAVSYDWSKGHEFYNSTKKNYIFLRSCYDELKPRTSS
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgtttaatcagagttcaatcggcggctttgggggcacccccacgccgagttcagcaaac
ccgatgaaggacttcgaagtaacgcagcccccggacgattcgataagttctttggcgttc
tctccggcaacgctcccccagaattttttaatagccgcaagttgggacaacaacgtgcgt
tgttgggaaatcgagcaaacggggaaaagcgtccccaaatccatgcaagcgtgtgggggc
cccgtacttgacgtgtgttggagtgacgatggcacaaaagtgtttatggcggggtgtgat
aaacaggccaaggcctgggatttgggcagtaaccaggtgatacaagttgcgcaacatgat
gcccccattaagacttgtcactggataaaggcttcgaactattcgtgtttaatgaccggg
tcttgggacaagactctcaaattttgggacacgcgcacccctaaccccatgatgagtatt
aatctacctgagaggtgttactgtgccgatgtggattaccctatggcggtggttgggacc
gcagggcgccagatcattgtctaccagctagacggcaagccccagcagtacaaagtgctt
gatagccccctcaaataccagcaccgctgtgtggccatttttagggataaaaagaagtct
ccaactgggtacgctttaggttcggtggaaggccgcgtcgccatccaatacgttaacccg
gcaaaccccaaagacaattttacgtttaagtgccacagatccaacggggcaccgaacggc
tatcaggacatttacgccgtcaatgacattgcattccacccagtccatggcactttggcc
actgttgggtccgatgggtctttcagtttctgggataaggacgcacgcaccaaattgaaa
tcttctgaccttatggaacaaccaatcacgcggtgcgctttcaacagcaatgggcaaatc
ttcgcctacgctgttagctacgactggtccaaaggacacgaattttacaattcaaccaag
aagaattacattttcttgcggtcatgttatgatgaattgaaaccacgaacctcttcataa

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