Tribolium castaneum (red flour beetle): 664102
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Entry
664102 CDS
T01046
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
664102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
664102
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
664102
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
MG280
LprI
Motif
Other DBs
NCBI-GeneID:
664102
NCBI-ProteinID:
XP_008192168
UniProt:
D1ZZX3
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Position
LG4:complement(5290178..5291648)
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AA seq
386 aa
AA seq
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MAKRTATSDLNHDNWDREDEPETAGTFTKASDEALKNRVIKVARRRNPISSVQSDDSKPS
AFGGFSGFGKTPSSASNTFGFLSNLNKTETSKTNGTTEKEAETSDKKLDEYYAKLKGLNE
SVTEWIKKHVSSNPFINLQPIFKDYDKYINELEKAKGEAASETSTSATTAPQFSFGTTST
TTTPKFSFGATSTASTGFSFGSSTTTVSFTSSTSTATLSGGDSSFKSQPFSFGNSGSDSG
KFSFTSTVIKLADEPKPQEQEDEDEPPKVEFTPVVEEGHIYSIRCKVFVKKDGTFGDHGV
GTLYLKPVPNGEKVQLIVRADTNLGKLICNFILSESIPMQRMGKKDVMLVCIPNPDTQPP
PVPILLRVKSPEDADELLKTLQKHKK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagaacggcaacaagtgatttaaatcacgataattgggatagggaggacgaa
ccagagacggctggaacgtttacaaaagcttcagatgaagctttgaagaacagagttata
aaagttgcccgcaggaggaaccccatatcatcagtccaaagtgacgatagcaaacccagc
gcattcggtggtttttctgggtttggtaaaacgccaagtagtgcatccaacacgtttgga
tttttgtcaaacttaaataaaaccgagactagtaaaaccaacggaactacggaaaaagaa
gcagagacttccgacaagaaattagacgaatattatgccaaattaaaaggattaaatgaa
agtgtcactgaatggataaaaaaacacgtgtcatcaaacccgtttatcaacttacaacca
attttcaaagattacgataaatatatcaacgaacttgaaaaggcgaaaggcgaggcagcg
tcagaaacatcaactagtgccacaactgcgccccaattttcctttggtacaacctctaca
accacaactcctaaattttcatttggggccacttctaccgcatccacaggattttcattt
ggctccagtaccacaacagttagtttcacttcaagcactagcacagctaccctatcagga
ggcgacagctcctttaaatcgcaaccgttttcgtttggtaattcaggctctgacagcggc
aaattttcattcacaagcactgtcataaaactagcagatgagccaaagccccaagagcaa
gaagacgaagacgagccgcccaaagttgagtttacgccagtggtagaagagggacacatt
tattcaatcagatgcaaggtttttgtgaagaaggatggcacttttggagaccatggcgtg
ggcactctgtacctcaagccagtcccaaacggcgagaaagtccaactcatcgtgcgcgct
gatacgaatttaggaaaattaatttgtaatttcattttgtcggaaagtatcccaatgcaa
aggatggggaaaaaggatgttatgttagtttgtattccaaatccagacacgcaacctcca
cccgtgccgattttattgcgggtgaaaagtccggaagatgccgatgagttgttgaaaact
ttgcagaaacacaaaaaatag
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