Tribolium castaneum (red flour beetle): 664231
Help
Entry
664231 CDS
T01046
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03022
Basal transcription factors
tca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
664231
09124 Replication and repair
03420 Nucleotide excision repair
664231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tca03021
]
664231
03400 DNA repair and recombination proteins [BR:
tca03400
]
664231
Transcription machinery [BR:
tca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
664231
DNA repair and recombination proteins [BR:
tca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
664231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
664231
NCBI-ProteinID:
XP_001816307
UniProt:
D2A3F8
LinkDB
All DBs
Position
LG4:3320181..3322363
Genome browser
AA seq
547 aa
AA seq
DB search
MTTSSEDVLLQVPQVRYKKGDGTLFLMDQRLIWMVENRDTVAVSHLYADIKSQKISPEGK
VKVQLQVVLHNGVSSTFHFTNRNGLQAQLADRDKVKEMLQTLLPKFKRKVDRELEEKNKL
LSSNPALLQLYKDLVMTEVVSSEEFWAQHASQYTQKQKQQPQDIGVSGAFLADIKPQTDG
CNGLKYNITPDIIECIFKTYPAVKKKYVENVPAKLSESQFWTKFFQSHYFHRDRKYAESK
DLFTECGKIDDQEMKKDIQTGVDDPLVNITEFEDKSLDEGYGVASEKTSVTSGTVSQAMI
KRFNQHSIMVLKATKKSNKSEETQNAPKQNGNVSEVERPDEGHVAKKQRILSKITYDDLD
SASSSTNSGPSLNLSKVERYLHGPMPDSSIEQLNPGEASSVLRGVLQETKQWQNRHPSSS
LVTPAAAVGALGELSPGGALMRGFQEQSLAQLVPSDIENEVRNLYLALCELLSHFWKCFP
PSTPNLEQKAVKMHEALHRYHTAKLKPFEDKLIRELSPLSHHLTKHLNQLLNAAYQKFSN
WQKIKNR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgactacttcgagtgaagacgtgctccttcaagtgccccaagttcgttacaaaaagggc
gatgggaccctttttctcatggaccaacgtttaatttggatggttgagaaccgcgacaca
gtcgcggtctcgcatctatacgctgatatcaaatcccagaaaatatcaccggaaggtaaa
gtgaaggttcagttgcaagtcgtgcttcataatggagtgtcctcgacgtttcattttacg
aacaggaacgggctacaagcccagttggctgaccgtgataaggttaaggagatgttacag
actttactgccaaaattcaaacgaaaagtcgatagggagttagaagagaaaaataaattg
ttgtcgtcaaatccggcgcttttgcagctttacaaagacttggtgatgactgaggtggtg
tcgtctgaggagttttgggcccaacatgcgtcccaatacacgcaaaagcaaaagcaacag
ccgcaggatattggtgtttctggtgccttcttagctgatattaagccacaaaccgacggt
tgcaacggcttaaaatacaacataacgcccgacataatcgaatgtatctttaaaacgtac
cccgcggttaagaaaaaatacgtggagaacgttcccgccaaattgtcagaatctcaattt
tggacgaagtttttccaatcgcattatttccaccgcgaccggaagtacgccgaaagcaaa
gatcttttcaccgaatgtggaaaaatcgacgatcaggaaatgaaaaaagatattcaaacc
ggtgttgatgaccctctggtcaacatcaccgaatttgaggataagtcactggatgagggc
tatggtgtcgcaagtgaaaaaacaagcgtcacctccggtacagttagtcaagcaatgatc
aaacgcttcaaccagcattcaattatggtgttaaaagccacgaaaaaatcaaacaaaagc
gaggaaacgcaaaacgcgcctaaacaaaacggaaacgttagcgaagtagagagacctgac
gaaggtcacgtagcgaaaaaacaacgaattctgagtaaaatcacttacgacgacttagat
tcagccagtagtagcactaacagcggtcctagtcttaatttatcgaaagtagagcgatat
ttacacggcccgatgcccgactctagcatagagcagttaaaccctggcgaagcctcctct
gtgttacgtggggtcctgcaggagacgaaacagtggcaaaatcggcacccgagcagctcg
ctagtgacgcccgcggcggccgtgggggccctcggagagctgtctcccgggggggcgctc
atgcgtggcttccaggagcagtcgctggcacaactggtgccgtctgatatcgaaaatgaa
gttaggaatttgtacctggccttgtgcgagttgttgagtcatttctggaagtgctttccg
ccaagtacgccgaatttggaacagaaagctgtgaaaatgcacgaggcgttgcatagatac
catactgccaaattgaaaccatttgaggataaattgatcagggagttatcaccgttatca
catcatttgaccaaacatcttaatcagttgctgaatgccgcctatcagaaatttagtaat
tggcaaaagatcaagaatcggtag
DBGET
integrated database retrieval system
