Tribolium castaneum (red flour beetle): 664411
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Entry
664411 CDS
T01046
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tca
Tribolium castaneum (red flour beetle)
Pathway
tca03013
Nucleocytoplasmic transport
tca03015
mRNA surveillance pathway
tca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
664411
09122 Translation
03013 Nucleocytoplasmic transport
664411
03015 mRNA surveillance pathway
664411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tca03019
]
664411
03041 Spliceosome [BR:
tca03041
]
664411
03009 Ribosome biogenesis [BR:
tca03009
]
664411
03012 Translation factors [BR:
tca03012
]
664411
Enzymes [BR:
tca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
664411
Messenger RNA biogenesis [BR:
tca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
664411
mRNA cycle factors
Stress granule specific factors
664411
Spliceosome [BR:
tca03041
]
Complex C
Other components
EJC/TREX
664411
Ribosome biogenesis [BR:
tca03009
]
Eukaryotic type
90S particles
Helicases
664411
Translation factors [BR:
tca03012
]
Eukaryotic type
Initiation factors
eIF-4
664411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Cas3-like_C_2
TniB
UvrD-helicase
Utp25_C
Motif
Other DBs
NCBI-GeneID:
664411
NCBI-ProteinID:
XP_975511
UniProt:
D6WR65
LinkDB
All DBs
Position
LG7:complement(10542098..10543798)
Genome browser
AA seq
404 aa
AA seq
DB search
MAVAKPSNRNAAFEDLSNVEFETSEDVEVIEQFKNMHLKEELLRGVFAYGFEKPSAIQQR
AIKPIIKGRDVIAQAQSGTGKTATFSIAILQSLDLQTRETQVLCLSPTRELAVQIQKVIL
ALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRALRTRSVKMLVLD
EADEMLNKGFKEQIYDVYRFLPPSTQVVLISATLPHEILEITSKFMTDPIRILVKRDELT
LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRENNFTVSSM
HGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgcaaaaccttcaaaccgcaatgcggctttcgaagacttgtcgaacgttgag
ttcgaaaccagcgaagatgtggaagtcatcgagcaatttaagaatatgcacctgaaggag
gagctccttcgcggtgtctttgcatatggttttgagaaaccatcagctatccaacagagg
gctatcaagccgataataaagggccgagatgttatcgctcaagcccagtcaggtaccggc
aaaacggccacattctcgatcgctattttgcagtcgcttgacttgcaaacgcgggaaacc
caagtactttgcttgtcgccaacgagggagttggccgtgcaaatccagaaagttatcctg
gctttgggggactttatgaacgtgcagtgtcacgcctgcattggtgggaccaatctggga
gaggatatcaggaagctggattatgggcaacatgttgttagtggaacacctggaagagtt
tacgacatgatcagacggcgcgcccttaggaccaggtccgtcaaaatgctggttttggac
gaagccgacgaaatgttaaacaaaggcttcaaggagcaaatctacgacgtttacaggttc
ctgccgccctccactcaagtcgtgttgatttctgcgactttgccccacgagattttggag
atcacgtcgaagttcatgacggacccgatccgtattttggtaaaacgtgatgaattaact
cttgaaggcatcaagcaatttttcgtcgcggttgagcgtgaggagtggaaatttgacaca
ctttgtgacttgtacgatactttaaccatcacgcaagctgttatcttttgcaacactaaa
cgcaaagtcgattggttgactgaaaaaatgcgcgaaaacaatttcaccgtgagttccatg
cacggtgatatgccccagaaggagagagataatattatgaaggagttcaggtcgggacag
agtcgtgtacttatcacgaccgatgtgtgggcgagaggtatcgacgtccagcaagtcagt
ttggtcattaattacgatttgccgaacaaccgtgagttgtacattcaccgtattgggcga
tctggcaggtttggtagaaagggtgttgcgattaatttcgtcaagtcggacgatatcagg
attttgcgggatattgagcagtattattccacacagattgacgaaatgccgatgaatgtc
gctgatttaatttaa
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