Trinickia caryophylli: U0034_00015
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Entry
U0034_00015 CDS
T09722
Symbol
rlmN
Name
(GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcar03009
]
U0034_00015 (rlmN)
Enzymes [BR:
tcar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
U0034_00015 (rlmN)
Ribosome biogenesis [BR:
tcar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
U0034_00015 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
WQE11859
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All DBs
Position
1:842..1984
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AA seq
380 aa
AA seq
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MTSSSTVNLLDFDAAGLLAYCESLGEKPFRAKQLQRWIHQYNAADFDGMTDLAKSLREKL
KGRATISMPPVISDHISADGTRKWLVDVGNGNAVETVFIPEETRGTLCVSSQAGCAVNCR
FCSTGKQGFSRNLTTGEIVGQLRMAEFALRAALGRVQPADAKGERVITNVVMMGMGEPLL
NYDALVPALRLMLDDNAYGLSRRRVTVSTSGVVPMMDRLGADLPVALAVSLHAPNDALRD
ELVPLNRKYPLAELMAACQRYLRVAPRDFITFEYCMLDGVNDTDTHARELLALTADVPCK
FNLIPFNPFPESGLTRSKSERIKRFAQILIDAGVVTTVRKTRGDDIDAACGQLAGAVKDR
TGVAERMARAERVIDVRQIL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcagttcaaccgtcaatcttctcgatttcgacgccgcaggtcttctcgcctat
tgcgagagccttggcgagaagccgtttcgcgccaaacagttgcaacgctggatacaccag
tacaacgccgcggatttcgacggcatgaccgatctcgcgaaatcgctgcgcgagaagctc
aagggccgggcgaccatcagcatgccgcccgtgatcagcgaccacatatcggccgacggc
acgcgcaagtggctggtggatgtgggcaacggcaatgccgtcgagacggtgttcatcccc
gaggaaacgcgcggcacgctttgcgtctcgtcgcaggccggctgcgccgtgaactgccgc
ttctgctccacgggcaagcaggggttctcgcgcaatctcactacgggcgaaattgtcggt
caactgcgcatggccgagttcgccttgcgcgcggcgctcggccgcgttcagccggctgac
gcgaaaggcgagcgggtcatcacgaacgtcgtcatgatggggatgggcgagccgctgctc
aattacgacgcgctcgttccggcgctgcgcctcatgctggatgacaacgcctatggcctg
tcgcggcgtcgcgtgacggtatcgacttccggtgtggtgccgatgatggaccggctcggc
gccgatttgccggtggcactggccgtctcgctgcatgcgccgaacgacgcgcttcgcgac
gaactcgtgccgctgaaccgaaaatatccgcttgccgaactgatggcggcctgccagcgt
tatctgcgagtggcgccgcgcgatttcatcaccttcgagtactgcatgctcgatggtgtc
aacgataccgatacgcatgcgcgcgaattgctcgcgttgacggccgacgtgccttgcaag
ttcaatctgatcccgttcaatccgtttcccgaatcggggctcacgcgatccaagtccgag
cgtatcaagcgattcgcccagattctgatcgatgcgggcgtcgtcacgaccgtgcgcaag
acgcgcggggacgacatcgatgcggcttgcgggcaattggcgggcgcggtaaaggatcgc
acgggtgtggccgagcgcatggcgcgtgcggagcgtgtcatcgacgtgcggcaaatactc
tga
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