Trinickia caryophylli: U0034_00040
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Entry
U0034_00040 CDS
T09722
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_00040 (bamB)
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_00040 (bamB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_CGLA
Beta-prop_EML_2
Motif
Other DBs
NCBI-ProteinID:
WQE11864
LinkDB
All DBs
Position
1:6754..7899
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AA seq
381 aa
AA seq
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MNLLKRFAVPVACAMTVLAMAACSSSKDERREPTPLTQFKSVLNVERIWRTSVGKAGRYL
FSPIAVGDAVYAAGESGTVAKIDGKTGKEIWRTKLHTDLTAGVGSDGTLTAVGAEKGGVY
VLDANGKLLWKGNVPGEVISPPLVGNGDVIVRTIDGQISAFNAQTGELKWVYHNRAVPLN
LRVSAGMTFAGDVAVLAGFPGGGLAAINLKTGDDYWQAPVSFPKGVTEVERINDVTGAPT
LVGAQACAVTFQGRIGCFDVNSGRPVWERPFSSATGVAQDSAVVASSDDWSVAVAYGATD
GRELWRNDKLKNRDLSVPLVLGPSVVFGDYKGFVHFLSREDGTFVARVPTDGSRITAAPV
VAGETLVVQTKDGDLFGFRPR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgctgaaacgtttcgccgtgcccgtcgcttgcgcgatgaccgtcctcgcgatg
gcggcctgctcgtcctccaaagacgagcgccgcgaaccgacgccccttacccagttcaag
tccgttctcaacgtcgagcggatctggcggacgagcgtcggcaaggccggccgttatctg
ttttcgccaattgccgtgggcgacgcggtctacgcggcgggcgagagcggcaccgtagcg
aaaatcgacggcaagaccggcaaggaaatctggcgaacgaagctgcatacggatctgacg
gccggagtcggcagcgatggtacgctcaccgcggtcggtgccgagaagggcggcgtgtac
gtgctcgatgcgaacggcaagctgctctggaagggcaatgtgccgggcgaagtcatttcg
ccgccgctcgtgggcaacggagacgtaatcgtccgaacgatcgatggacagatcagtgca
ttcaacgcgcaaaccggcgagttgaagtgggtctatcacaaccgtgcggtgccgctgaat
ctgcgggtatcggccggcatgacattcgcaggcgatgtggccgtgcttgcagggttcccg
gggggcggtctcgcggcgatcaatctgaagacgggcgacgattactggcaggcgccggtg
tcgtttccgaagggcgtgaccgaggtggagcggatcaacgacgtcacgggtgccccgacg
ctggttggggcgcaggcgtgcgccgtgacgtttcagggccgaatcggctgtttcgacgtc
aattccggccggccggtatgggagcggccgttttcgagtgcgacgggcgtcgcgcaggac
agcgccgttgtcgcgtcgagcgacgactggtcggtggcggtggcgtacggtgcgaccgac
gggcgcgagctctggcgtaacgacaagctcaagaaccgcgacttgagcgtgccgctcgtg
ctcgggccgtccgtggtgttcggagactacaagggcttcgtgcacttcctttcgcgcgag
gacggcactttcgttgcgcgcgtgccgacggacggtagccggatcacggcggcgcccgtc
gtggcgggcgagacgctcgtcgtgcaaacgaaagacggcgatctgttcggttttcggccg
cgctga
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