KEGG   Trinickia caryophylli: U0034_00110
Entry
U0034_00110       CDS       T09722                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
tcar  Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:tcar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tcar03400]
    U0034_00110
Enzymes [BR:tcar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     U0034_00110
DNA repair and recombination proteins [BR:tcar03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    U0034_00110
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2 ResIII T4SS-DNA_transf Glyco_tran_10_N
Other DBs
NCBI-ProteinID: WQE11878
LinkDB
Position
1:22945..25188
AA seq 747 aa
MNSLPHDASPAEKPNARPAGAPFPLSARHGAELDAIFADGGLLARAIDGYRPRASQIEMA
RAVAATMEASSRAMPEPAMFEAQRRPARRLQATQEPAVADAAGKDEAGGVDAAAGENTLI
VEAGTGTGKTYAYLVPAMLWGGKVIVSTGTKHLQDQLFQRDIPTVREALAVPVSVAMLKG
RANYLCHYYLQRTADNGRLPSRQDTVHLQEIVRFAKLTRTGDKAELASVPETAPVWPMVT
STRENCLGQECPHYKECFVMQARREAQQADIVVVNHHLFFADIMLRDTGMAELLPTANTV
VFDEAHQLPETATLFFGETLSTSQLLELARDTVAEGLSHARDATDWVKLGAALERAARDI
RLAFKEDVVRLSATQLADDHPLFVSLGALEGALDALAGALAAQAERAESLGACLRRAREL
QDQLARWTTPAEPASVQPSGAASQDSKNGGEPSAGADERIRWIEVFSHSVQLHETPLSVA
PIFAKQRAGVPRAWIFTSATLSVRGDFTHYAAQMGLDARRSMTLPSPFDYGTQGLLYVPR
NLPQPSSPAFTDAVFDAALPAIEAAGGGAFVLCTTLRAVDRIAAKLRDVIDSRGWAMPLL
VQGDASRTELLDRFRAYGNAILVGSQSFWEGVDVRGDALSLVVIDKLPFAPPDDPVLSAR
LDVLAKKGLSPFAVHQLPQAVITLKQGAGRLIRAETDRGVLMICDTRLVDKPYGRRIWQS
LPPFKRTREIDAVRSFFAERKEAEPQA
NT seq 2244 nt   +upstreamnt  +downstreamnt
ttgaattcactgccgcacgacgcttcccccgcagagaaaccgaacgcgcgtcccgccggg
gcgccgtttccgctgagcgccaggcacggcgccgagctggacgcgattttcgcggacggc
ggcttgcttgcgcgtgcgatcgacggctatcgcccccgcgcgtcgcagatcgaaatggcg
cgtgccgtggcggcgacgatggaagcgtcgagccgggccatgcccgaacccgcgatgttc
gaagcgcagcggcgccccgcgcggcggctccaggccacgcaggagcccgcggtggccgac
gcggccgggaaggacgaggcgggcggggtggacgccgcggcgggcgagaacacgctcatc
gtcgaagccggcaccggtacgggcaagacctacgcatacctcgtccctgcgatgctatgg
gggggcaaggtcatcgtgtccacgggtaccaagcatcttcaggatcagctcttccagcgc
gacattccaacagtgcgggaagcgctcgccgtgccggtcagcgtggcgatgctgaagggg
cgtgccaattatctctgtcactactatctgcagcgcaccgccgacaatggccgcctgccg
tcgcgacaggacacggtgcatctgcaggaaatcgttcgcttcgcgaagctcacgcgtaca
ggtgataaggccgaactcgcgagcgtccccgaaacggcgccggtgtggccgatggtgacg
tcgacacgcgagaactgcctcgggcaggagtgcccgcactacaaggaatgcttcgtgatg
caggcacgccgcgaagcgcagcaggccgacatcgtcgtcgtgaaccaccatttgttcttc
gcggacatcatgcttcgcgatacgggcatggccgaattgctgccgacggcgaacacggtc
gttttcgacgaggctcaccaactgccggaaacggcgacgctctttttcggcgaaactctc
tcgacgagccagttgcttgaactggcgcgcgatacggttgccgaagggttgagccatgca
cgcgacgctacggactgggttaagctcggtgccgcgctcgagcgcgccgcacgcgacatc
cggctggcattcaaggaggatgtcgtgcggctgtcggctacgcagttggccgacgaccat
ccgctcttcgtatcgctcggcgccctcgaaggcgcactcgatgcactggccggggcattg
gccgcgcaggcggagcgggctgaatcgctcggcgcgtgcctgcgccgggcgcgcgaactg
caagaccagctcgcgcgctggaccacgcctgccgagccggcgagtgttcagccctccggt
gccgcatcgcaggactcgaagaacggcggcgagccttcggccggcgctgacgagcgtatt
cgctggattgaagtgttttcgcactcggtccagctgcatgaaacgccgctctcggttgct
ccgattttcgcaaagcagcgtgccggcgtgccgcgcgcatggattttcacgtcggccaca
ctgtcggtgcgaggagacttcacgcactacgccgcgcagatggggctcgacgcgcggcgc
tcgatgacgctgcccagccccttcgactacggcacgcaggggctgctttacgtgccgcgc
aatttgcctcagccgtcgtcacccgcgttcaccgatgctgtattcgacgcggctttgccg
gcgatcgaggcggccggcggaggcgcattcgtgctctgtacgacgctgcgcgccgtcgat
cgcatcgcagccaagctgcgcgacgtcatcgattcgcgcggctgggcgatgccgttgctc
gtgcagggggatgcgagccggaccgagttgctcgatcgctttcgtgcctatggcaatgcg
attctcgtgggcagccagagcttctgggagggcgtcgatgtgcgaggcgatgcactatcg
ctcgtcgtcatcgacaagctgccgtttgctccgcctgacgatccggttctttcggcccgc
ctcgacgtgcttgcgaaaaaaggcctcagtccgttcgcagttcatcaactgccgcaggct
gtcattaccttgaagcagggggcggggcgcctcattcgggcggagaccgatcgcggggtg
ctgatgatttgcgacacgcgccttgtcgataaaccctacggccggcgcatctggcaaagt
ctgccgccgttcaagcgaacgcgggagatcgatgccgtacgatcgtttttcgccgagcgc
aaggaggccgaaccgcaagcgtaa

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