Trinickia caryophylli: U0034_00125
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Entry
U0034_00125 CDS
T09722
Symbol
pgeF
Name
(GenBank) peptidoglycan editing factor PgeF
KO
K05810
purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:
2.4.2.1
2.4.2.28
3.5.4.4
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00230
Purine metabolism
tcar00270
Cysteine and methionine metabolism
tcar01100
Metabolic pathways
tcar01232
Nucleotide metabolism
Module
tcar_M00958
Adenine ribonucleotide degradation, AMP => Urate
tcar_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
U0034_00125 (pgeF)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
U0034_00125 (pgeF)
Enzymes [BR:
tcar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.1 purine-nucleoside phosphorylase
U0034_00125 (pgeF)
2.4.2.28 S-methyl-5'-thioadenosine phosphorylase
U0034_00125 (pgeF)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.4 adenosine deaminase
U0034_00125 (pgeF)
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GFIT
Motif
Pfam:
Cu-oxidase_4
Motif
Other DBs
NCBI-ProteinID:
WQE11880
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Position
1:27504..28325
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AA seq
273 aa
AA seq
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MSERALDWEDCLRPGWPVPARVRGLFTMRVGGVSGIPYGVFADGREEAGGLNLGLHTGDE
RDRVMRNRARLSALIGARPVWLEQVHGDRVVRADEVPEQAAPPEADASVTNVPGVACVVM
VADCLPVLIADRHGRAVGAAHAGWRGLAAGVVEKTVERVAELAGTSASELCVWLGPAIGP
CAFEVGGEVREAFMQTADASEQERVDAAFEPRPGAPGKYLADLYALARVRLARCGVYSIS
GGDACTVTQRERFYSYRRDGTTGRMAALVWLAD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacgagcgctcgattgggaagattgtctgaggccggggtggccggttccggcg
cgtgtgcgggggctcttcaccatgcgcgtgggcggtgtgagcggcatcccctacggtgtg
ttcgcggatgggcgcgaagaggcgggggggctgaacctcggtttgcacaccggcgacgag
cgcgatcgtgtcatgcgtaaccgcgcacgcctgtcggcgctcatcggtgcccgccccgta
tggctcgagcaggttcacggcgacagggtcgtgcgcgccgacgaggttcccgaacaggct
gcgccgcccgaagcggatgccagcgtcacgaacgtgccgggcgtcgcctgcgtcgtcatg
gtggcggattgtcttccggtgctgattgccgatcggcatggacgggccgtcggcgccgcg
cacgccggatggcgggggctggccgccggcgtcgttgaaaagacggtcgagcgcgttgcg
gagctggccggtacgtcggcaagcgagctttgcgtctggctcgggccggctatcgggccg
tgcgcgttcgaagttggcggcgaggttcgcgaggctttcatgcaaacggccgacgcgagc
gaacaggaacgggttgacgccgcattcgagccgcggcccggtgcgccgggcaagtatctg
gccgatctttatgcgctcgcgcgcgtgcggctcgcgcgctgcggtgtctacagcatttcg
ggcggcgatgcatgcaccgtcacccaacgcgagcgcttttactcctatcggcgtgacggc
acgacggggaggatggccgccctcgtctggttggcggactga
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