Trinickia caryophylli: U0034_00325
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Entry
U0034_00325 CDS
T09722
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcar03000
]
U0034_00325
Transcription factors [BR:
tcar03000
]
Prokaryotic type
Helix-turn-helix
LacI family
U0034_00325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
HTH_3
HTH_IclR
TetR_N
HTH_26
Motif
Other DBs
NCBI-ProteinID:
WQE11915
LinkDB
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Position
1:75660..76727
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AA seq
355 aa
AA seq
DB search
MSVNPARLPRRATISDVAREAGTGKTSVSRYLNGETNVLSAELRARIEAAIARLDYRPNQ
MARGLKRGRNRLIGMLVADLTNPYTVEVLRGVEAACHALGLMPLVCNAANELEMERRYVQ
LMTTYRVEGVIVNAMGVNEETLRPLGASGTPAVLVDRTVAGLEADMVGLDNVAAVELGMH
HLIEQGFERIRFVVQPFENVSSRRLRVLAFGNALDAARQAAAMPAWLDGKTFVLDLTDAE
AVARTYAEIDADLDAARNGERIAYFAANGLAGLSLALHFHTRYGDDWQRRVALMAIDDPE
WAELVGVTTIRQPTYAIGYRAVEFLHERIEGATAPARAAILPGELVVRNSTRRAQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcaatccggcgagactccctcgccgcgcgaccatcagtgatgtggcgcgcgaa
gcaggaacggggaagacgagcgtgtcgcgctatctgaacggtgagaccaatgtgctctcc
gccgagttgcgggcgcgcatcgaggccgccattgcacgcctggactatcgaccgaatcag
atggcgcgcgggttgaagcgcgggcgcaatcgcctcatcggcatgctcgttgccgatctc
acgaatccttataccgtcgaggtgctgcgtggcgtggaggcggcctgtcacgcgctcggt
ctgatgcctctcgtgtgcaacgccgccaacgagctcgagatggagcgtcgctacgtgcag
ttgatgacgacgtaccgtgtcgagggggtaatcgtcaacgccatgggcgtcaacgaggaa
acgctgcgcccgctcggcgccagcggcacgcccgcggtgctcgtcgaccgcacggtggcc
gggctcgaggccgacatggtggggctcgacaatgtagcggctgtcgagctcgggatgcac
cacttgatcgagcagggtttcgagcgcattcgtttcgtcgtgcagccgttcgaaaatgtc
agctcgcgccggttgcgggtgcttgcgttcggcaatgcgctcgatgcggcaaggcaggcg
gcggccatgccggcatggctcgacggcaaaacctttgttctcgatctgaccgacgccgag
gctgtcgcacgcacgtacgccgaaatcgatgccgacctcgacgcggcccgcaatggggaa
cgcatcgcttattttgcggcgaatggactcgcgggcctatcgctcgcgcttcacttccat
acgcgctacggcgacgactggcagcgtcgggtcgccctcatggcgatcgacgatcctgaa
tgggccgagctcgtcggcgtgacgacgatccggcagcctacctatgcaatcggctaccgc
gccgtggagttcctgcacgagcgtatcgaaggcgcgaccgcgccggcgcgcgcagcgatc
ctgccgggcgaactcgttgtgcgaaactctacgcggcgtgcacaatag
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