Trinickia caryophylli: U0034_01080
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Entry
U0034_01080 CDS
T09722
Symbol
selD
Name
(GenBank) selenide, water dikinase SelD
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
tcar
Trinickia caryophylli
Pathway
tcar00450
Selenocompound metabolism
tcar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
U0034_01080 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcar03016
]
U0034_01080 (selD)
Enzymes [BR:
tcar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
U0034_01080 (selD)
Transfer RNA biogenesis [BR:
tcar03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
U0034_01080 (selD)
Prokaryotic type
U0034_01080 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIRS
AIRS_C
SLH
Motif
Other DBs
NCBI-ProteinID:
WQE12054
LinkDB
All DBs
Position
1:complement(244938..246002)
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AA seq
354 aa
AA seq
DB search
MNASSSAGTNVPRLTELSHGGGCGCKIAPGVLAELLKRTTPQPLFADLLVGSETADDAAV
YRLNDEQAIVATTDFFMPIVDDPYDFGRIAATNALSDIYAMGGKPLFALAIVGMPINVLP
RETIARVLQGGESICAEAGIPVAGGHSIDSVEPIYGLAAIGVVDPRRVLRNASARAADVL
VLGKPLGVGIMSAALKKGRLDAAGYAAMIAATTRLNRPGTALAALEGVHAMTDVTGFGLL
GHLLELCRGAGLRARVDYASLPWFDGVAALAEAGLVTGASGRNWAAYGAQVTLSPSLPPI
AQSLLTDPQTSGGLLVSCAPDAVEAVLACMRQGGFEEASVIGEMARGEPHVFVG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcctcatcgagtgctggcacgaacgtaccgcggctgaccgagctctcgcacggt
ggcggctgcggttgcaagatcgcgcccggcgtgctcgcggaactgctcaagcgaacgacg
ccgcagcctttgtttgccgatctcctggtgggctccgagacggccgacgatgcggcggtc
taccgcctcaacgacgaacaggcgatcgtggcgacgacggactttttcatgccgatagtc
gacgatccctacgacttcggacgcatcgcggcaacgaatgccttgtcggatatttatgcg
atgggcggcaagccgctctttgcgctggcgatcgtcggcatgccgatcaacgtgctgccg
cgcgagacgatcgcccgtgtgctgcaaggcggcgaatcgatctgcgcggaggcgggcatt
ccggtcgccggcgggcactcgatcgattccgtcgagccgatctacgggcttgccgcgatc
ggtgtcgtcgatccgcgccgggtgctgcgcaatgcgagcgcgcgcgccgcagacgtgctt
gtgctcggcaagccgctcggcgtcgggatcatgtcggcggcgctgaaaaaggggcgcctc
gacgcagcgggctacgcggcaatgatcgcggcgacgacgcggctcaaccgccccggtacg
gcgcttgccgccttggagggtgtgcacgcgatgaccgatgtcacgggtttcggcttgctt
ggccacctgctcgagctctgtcgcggcgcggggctgcgtgcgcgcgtcgattatgcgtcg
ctgccctggttcgacggcgttgccgcgctggccgaagcggggttggtcacgggggcctcg
gggcgcaattgggccgcgtacggtgcgcaggtcacgctttcaccgtcgctgccgccgatc
gcacagtcgctcctgaccgatccgcagacatcgggcggactgctggtttcctgcgcgccg
gacgccgtggaagcggtgcttgcctgcatgcggcagggcggcttcgaggaggcgtcggtg
attggcgagatggcgcgcggcgagccgcacgtgttcgtgggctga
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