Trinickia caryophylli: U0034_01340
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Entry
U0034_01340 CDS
T09722
Name
(GenBank) ABC transporter ATP-binding protein
KO
K23537
general nucleoside transport system ATP-binding protein
Organism
tcar
Trinickia caryophylli
Pathway
tcar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0034_01340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_01340
Transporters [BR:
tcar02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
U0034_01340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
AAA_30
TPR_25
MukB
SMC_N
AAA_27
AAA_16
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WQE12101
LinkDB
All DBs
Position
1:complement(309447..311036)
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AA seq
529 aa
AA seq
DB search
MSDIPLKGGPETRAARVPRLALAGITKRYPSVLANDAVDLTVAPGEIHAVLGENGAGKST
LMKIIYGAVRPDAGEISWEGHAVEITSPAAARKLGIGMVFQHFSLFETLTVAENIALALD
EPFDLGALARRIGEVSAEYGLEIDPLRHVHSLTVGERQRVEIVRCLLQHPRLLIMDEPTS
VLTPQAVRKLFETLRRLAAQGCSILYISHKLDEIQALCDTATVMRAGRVTGSVTPRNETH
ASLAQLMVGHSLPDYTRRPHTPGEVLLSVQHLTVASDDPFGTSLADVSFDVHAGEIFGIA
GVSGNGQAELLAALSGERRGNAARESVSICGEPAAHLAPDARRRLGFAFVPEERLGRGAV
PAMTLAENGLLTAHRQARMVRHGWIGARAMHAFAARCIERFDVRCGGTEALAQSLSGGNL
QKFIVGREILQAPKVLVVAQPTWGVDVGASAFIRQQLLDLSASGVAVLVVSEELDELFDI
CDRIAVLAGGRLSPARKTGETNAEEIGRWMAGLFGERGAVAAAEDPLHA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattccattgaagggcggtcccgagactcgcgcggcgcgcgtgccgcgtctt
gcgctggccggcatcacgaaacggtatccgagcgtgctcgccaacgacgcggtggatctg
accgtcgcgcccggagagattcatgcggtgctgggtgaaaacggcgccggaaaaagcacg
ctgatgaagatcatctacggcgcggtgcggccggatgcgggggagatcagctgggaaggg
cacgccgtcgagatcaccagcccggccgccgcgcgcaagctcggcatcggcatggtgttt
cagcacttttcgttattcgagacgctgacggtggccgagaatatcgccctcgcgctcgac
gaaccgttcgatctcggggcgctggcgcgccgcatcggcgaagtatcggccgaatacggg
ctcgagatcgatcccctgcggcacgtgcacagcctgaccgtgggcgagaggcagcgcgtc
gagatcgttcggtgcctgctgcagcacccgcgcctcttgatcatggacgaacccacttcc
gtgctcacgccgcaagccgtgcgcaagctcttcgagacactgcggcggctcgccgcgcaa
ggatgcagcattctctacatcagtcacaagctcgatgagattcaggcgctttgcgatacg
gccaccgtcatgcgcgcgggccgcgtcacgggcagcgtgacaccgcgcaacgagacgcac
gcgtcgctcgcgcaactgatggtcgggcactcgctgccggactacacgcgccggccgcat
acacccggcgaggtcctgctttcggtccagcacctgacggtggcgagcgacgatccgttc
ggcacctcgctcgccgatgtttccttcgacgtgcacgcgggcgaaatcttcggtattgcg
ggtgtctcgggcaatgggcaggccgaactgctggcggcgctctcgggcgagcggcgcggc
aacgcggcgcgcgagtcggtctcgatctgcggcgagccggcggcgcaccttgcgcccgac
gcgcggcgccggctcggcttcgcgttcgtgccggaggagcgtcttggccgcggcgcggtg
cccgcgatgacgctggccgaaaatggcctgctgaccgcgcaccgtcaggcgcgcatggtg
cgccatggctggattggcgcacgcgcgatgcatgcatttgccgcgcgttgcatcgaacgt
ttcgacgtgcgctgcggcggcaccgaggcgctcgcgcaatcgctgtcgggcggcaacctg
cagaagttcatcgtcgggcgcgagatccttcaagcgccgaaggtgctcgtcgtcgcgcag
cccacctggggcgtggacgtaggcgcatcggccttcatccgccagcaactgctcgatctg
tcggccagcggtgtggcagtgctcgtcgtgtccgaggagctcgacgaactcttcgatatc
tgcgaccgcattgcggtactggccggcggccgcctttcgccggcacggaaaacgggcgaa
acgaacgccgaggagatcggccgctggatggcgggcctcttcggcgagcgcggtgccgtt
gcggccgccgaggacccgctgcacgcatga
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