Trinickia caryophylli: U0034_01725
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Entry
U0034_01725 CDS
T09722
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
tcar
Trinickia caryophylli
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tcar03029
]
U0034_01725 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_01725 (bamA)
Mitochondrial biogenesis [BR:
tcar03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
U0034_01725 (bamA)
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_01725 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
MIOX
YqfD
Motif
Other DBs
NCBI-ProteinID:
WQE12172
LinkDB
All DBs
Position
1:complement(387520..389823)
Genome browser
AA seq
767 aa
AA seq
DB search
MLKPHRFVPKTVAVAAIAAHGLVAHATTPFVVKDIKINGLQQIEPGTVFAYLPIKQGDTF
SDDKASEAIRALYATGFFNDVQVSTEGDVVIVNVVERSAIASIDFSGLHEFEKDALLKAL
KSVGLSQGRYYDKSLVDRAEQELKRQYLTRGFYAAEVTTTVTPVDRNRVSILFSVNEGPS
AKIRQVNFVGNKAFSTSTLRSEMQLSTPNWFSWYTKNDLYSKDKLTVDLENVRKYYLNRG
YLEFNIESTQVSISPDKKDMYLTLTVHEGEPYTISSIKLAGNLLDRGPELQKLVKIKPGE
RFSADKLQATTKAVVDKLGEYGYAFATVNAQPEIDQLHHKVALTLQIDPSRRVYVRRVNI
VGNTRTRDEVVRREMRQLESSWFDSSRLALSKDRVNRLGYFTDVDVTTVPVEGTADQVDV
DVKVTEKPTGAITLGAGFSSTDKVVLSAGVSQDNVFGSGTSLAVNVNTARSYRTLTVTQV
DPYFTVDGIKRITDVYYRTTQPLYYSTDSSFRIITAGGDLKFGIPFSEVDTVYFGAGFEQ
NRLDVDSATPQSYRDYVNEFGRVSNNIPITAAWARDARDSALVPSRGYFTQANAEYGTPI
GATQYYKADIQAQYYYSFARGFVLGLNFQGGYGKGLSGKNYPIFKNYYAGGIGSVRGYEP
SSLGPRDATTGDPIGGSKMLVGNIELTFPLPGTGYDRTLRVFTFLDGGNVWGELGNSTGA
NGLRYGYGVGLAWISPIGPLKLSLGFPLQKHEGDKYQKFQFQIGTAF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttgttgaaacctcatcgctttgttcctaagactgtcgcggtcgcggctatcgccgcccac
gggctcgtggctcatgcaacgacgccgttcgtggtgaaagacatcaagatcaacgggctg
cagcagatcgaacccggcacggtcttcgcctacctgccgatcaagcaaggcgatacgttc
tcggacgacaaggcatcggaggccattcgggcgctttacgccacgggcttcttcaacgac
gtgcaggtgtcgacggaaggcgatgtggtcatcgtcaacgtggtcgagcgttcggccatt
gcctcgatcgatttttcggggctgcacgaattcgagaaggacgcgctgctcaaggcgctc
aagagcgtcggtttgtcgcaagggcgctattacgacaagtcgctcgtcgatcgcgcggag
caggaactcaagcgccagtatctgacgcgcggcttctatgcggccgaggtgacgaccacg
gtcacgccggtggaccgcaaccgtgtttcgattctgttctcggtgaacgaagggccgagc
gcgaagatccgccaggtcaacttcgtcgggaacaaggcgttcagtacgagcacgctgcgc
agcgagatgcagttgtccacgccgaactggttctcctggtacacgaagaacgatctgtac
tcgaaggacaagctgacggtcgacctcgagaacgtccgcaagtactacctgaaccgcggc
tacctcgagttcaacatcgagtcgacgcaggtgtcgatctcgcccgacaagaaagacatg
tacctcaccttgacggtgcatgagggcgagccgtacacgatctcgagcatcaagctcgcg
ggcaatctgctcgatcgcgggcccgagctgcaaaagctcgtcaagatcaagccgggcgag
cgcttctcggcggacaaactgcaggccaccaccaaggcggtcgtcgacaaactcggcgaa
tacggctatgcgttcgcgacggtcaatgcgcaaccggagatcgatcagctgcaccacaaa
gtggcgctcacgctgcagatcgatccgagccggcgagtgtatgtgcgccgcgtcaatatc
gtcggcaacacgcgcacgcgcgacgaagtcgtgcgtcgcgaaatgcggcagctcgaaagc
tcgtggttcgattcgagccggctggcgttgtcgaaggatcgcgtgaaccggcttggctac
ttcaccgacgtcgatgtcacgaccgtacccgtcgaaggtacggccgatcaggtcgacgtc
gacgtgaaggtgaccgagaagccgacgggcgctattacgctcggcgccggtttctcgtcg
accgacaaggtggtgttgtcggccggcgtctcgcaggacaacgtgttcggctcgggcacg
agcctcgccgtgaacgtcaataccgcgcgcagctaccgcacgttgacggtgacgcaggtc
gacccttacttcacggttgacggcatcaaacggatcaccgacgtttactaccgcacgacg
cagccgctttactactcgaccgactcgagcttccgcatcatcacggccggtggcgatctg
aagttcggtattccgttctccgaagtcgatacggtctacttcggcgccgggttcgagcag
aaccggctcgacgtggactcggccacgccgcaaagctatcgcgattacgtgaacgaattc
ggacgcgtttcgaacaacattccgatcacggcagcgtgggcccgcgatgcgcgcgacagc
gcgctcgtgccgagccgcggctacttcacgcaggccaacgccgaatacggtacgccgatt
ggtgcaacgcaatactacaaggccgacatccaggcccagtattactactcgttcgcacgc
ggcttcgtgctcggcttgaacttccagggcggctacggtaaaggcctgagcggcaagaac
tacccgatcttcaagaactactacgcgggcggtatcggttcggtgcgcggttacgagccg
agctcgctgggtccgcgcgacgcgacgacgggcgacccgatcggcggctcgaagatgctc
gtcggcaatatcgaactgacgttcccgctgccgggtaccggctatgaccggacgctgcgc
gtgttcaccttcctggacggcggcaacgtctggggcgaactcggcaacagcacgggggca
aacggcctgcgctacggctatggcgtgggtctcgcatggatttcaccgatcggcccgctc
aagctgagtctcggcttcccgttgcagaagcatgaaggcgacaagtaccagaaattccag
ttccagatcgggacggcattctga
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